A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =25, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
166.8
A3-B1
A15-B13
A20-B18
A26-B24
A39-B37
(
A3
B1
A15
B13
A20
B18
A26
B24
A39
B37
)
2
163.8
A7-B5
A15-B13
A20-B18
A26-B24
A39-B37
(
A7
B5
A15
B13
A20
B18
A26
B24
A39
B37
)
3
162.5
A5-B3
A15-B13
A20-B18
A26-B24
A39-B37
(
A5
B3
A15
B13
A20
B18
A26
B24
A39
B37
)
5
133.9
A32-B3
A41-B12
A50-B21
A57-B28
(
A32
B3
A41
B12
A50
B21
A57
B28
)
6
126.4
A74-B4
A83-B13
A94-B24
A102-B32
(
A74
B4
A83
B13
A94
B24
A102
B32
)
7
124.4
A65-B1
A70-B6
A80-B16
A100-B36
(
A65
B1
A70
B6
A80
B16
A100
B36
)
8
123.1
A41-B4
A67-B30
A74-B37
(
A41
B4
A67
B30
A74
B37
)
9
118.3
A19-B10
A28-B19
A36-B27
A45-B36
(
A19
B10
A28
B19
A36
B27
A45
B36
)
10
112.5
A85-B4
A94-B13
A101-B20
(
A85
B4
A94
B13
A101
B20
)
11
111.8
A43-B6
A67-B30
A74-B37
(
A43
B6
A67
B30
A74
B37
)
12
111
A11-B5
A25-B19
A42-B36
(
A11
B5
A25
B19
A42
B36
)
13
105
A21-B5
A26-B10
A39-B23
(
A21
B5
A26
B10
A39
B23
)
14
104.7
A85-B16
A90-B21
A97-B28
(
A85
B16
A90
B21
A97
B28
)
15
104
A91-B4
A98-B11
A117-B30
(
A91
B4
A98
B11
A117
B30
)
16
103.2
A63-B11
A69-B17
A78-B26
(
A63
B11
A69
B17
A78
B26
)
17
102.7
A7-B4
A15-B12
A39-B36
(
A7
B4
A15
B12
A39
B36
)
18
98.2
A21-B1
A37-B17
A56-B36
(
A21
B1
A37
B17
A56
B36
)
19
97.5
A24-B4
A37-B17
A56-B36
(
A24
B4
A37
B17
A56
B36
)
20
96.6
A74-B3
A92-B21
A103-B32
(
A74
B3
A92
B21
A103
B32
)
21
94
A32-B2
A46-B16
A54-B24
(
A32
B2
A46
B16
A54
B24
)
22
93.5
A63-B13
A75-B25
A86-B36
(
A63
B13
A75
B25
A86
B36
)
24
90.8
A58-B5
A69-B16
A87-B34
(
A58
B5
A69
B16
A87
B34
)
25
90.5
A30-B12
A38-B20
A46-B28
(
A30
B12
A38
B20
A46
B28
)
26
89.5
A41-B5
A50-B14
A56-B20
(
A41
B5
A50
B14
A56
B20
)
27
88.7
A52-B4
A85-B37
(
A52
B4
A85
B37
)
28
88.4
A19-B17
A26-B24
A39-B37
(
A19
B17
A26
B24
A39
B37
)
29
87.7
A83-B14
A89-B20
A97-B28
(
A83
B14
A89
B20
A97
B28
)
30
87.4
A54-B14
A61-B21
A75-B35
(
A54
B14
A61
B21
A75
B35
)
31
86.8
A111-B7
A116-B12
A121-B17
(
A111
B7
A116
B12
A121
B17
)
32
86.6
A47-B5
A58-B16
A76-B34
(
A47
B5
A58
B16
A76
B34
)
33
86.2
A52-B5
A61-B14
A68-B21
(
A52
B5
A61
B14
A68
B21
)
34
85.2
A43-B14
A50-B21
A57-B28
(
A43
B14
A50
B21
A57
B28
)
37
84.5
A63-B5
A72-B14
A79-B21
(
A63
B5
A72
B14
A79
B21
)
38
83.9
A9-B17
A27-B35
(
A9
B17
A27
B35
)
39
83.8
A28-B10
A38-B20
A46-B28
(
A28
B10
A38
B20
A46
B28
)
40
83.4
A13-B3
A30-B20
A38-B28
(
A13
B3
A30
B20
A38
B28
)
41
83.3
A63-B4
A72-B13
(
A63
B4
A72
B13
)
42
82.9
A3-B15
A11-B23
A17-B29
(
A3
B15
A11
B23
A17
B29
)
43
82.4
A37-B4
A46-B13
A51-B18
(
A37
B4
A46
B13
A51
B18
)
44
81.7
A35-B10
A40-B15
A45-B20
(
A35
B10
A40
B15
A45
B20
)
45
79.1
A13-B2
A22-B11
A41-B30
(
A13
B2
A22
B11
A41
B30
)
46
78.6
A52-B11
A57-B16
(
A52
B11
A57
B16
)
47
78.6
A99-B13
A107-B21
A115-B29
(
A99
B13
A107
B21
A115
B29
)
48
77.4
A80-B4
A93-B17
(
A80
B4
A93
B17
)
49
75.7
A74-B12
A96-B34
(
A74
B12
A96
B34
)
51
72.4
A74-B16
A79-B21
(
A74
B16
A79
B21
)
52
72
A69-B4
A93-B28
(
A69
B4
A93
B28
)
53
71.9
A85-B12
A96-B23
(
A85
B12
A96
B23
)
54
71.9
A99-B12
A117-B30
(
A99
B12
A117
B30
)
55
70.8
A39-B24
A52-B37
(
A39
B24
A52
B37
)
57
69.4
A47-B13
A53-B19
(
A47
B13
A53
B19
)
58
69.4
A47-B17
A54-B24
(
A47
B17
A54
B24
)
59
68.5
A52-B16
A57-B21
(
A52
B16
A57
B21
)
60
67.6
A74-B11
A80-B17
(
A74
B11
A80
B17
)
61
67.6
A85-B11
A91-B17
(
A85
B11
A91
B17
)
62
66.7
A113-B10
A120-B17
(
A113
B10
A120
B17
)
63
65.8
A30-B28
A39-B37
(
A30
B28
A39
B37
)
64
65.5
A1-B12
A20-B31
(
A1
B12
A20
B31
)
65
65.4
A1-B27
A11-B37
(
A1
B27
A11
B37
)
66
64.9
A3-B13
A25-B35
(
A3
B13
A25
B35
)
67
64.7
A85-B3
A98-B16
(
A85
B3
A98
B16
)
69
64.2
A47-B4
A75-B32
(
A47
B4
A75
B32
)
70
64.2
A58-B4
A86-B32
(
A58
B4
A86
B32
)
71
63.9
A95-B20
A103-B28
(
A95
B20
A103
B28
)
72
63.6
A41-B16
A46-B21
(
A41
B16
A46
B21
)
73
63.3
A74-B13
A86-B25
(
A74
B13
A86
B25
)
75
63.1
A52-B17
A68-B33
(
A52
B17
A68
B33
)
76
63
A5-B14
A16-B25
(
A5
B14
A16
B25
)
78
62.8
A52-B13
A75-B36
(
A52
B13
A75
B36
)
80
62.4
A5-B15
A25-B35
(
A5
B15
A25
B35
)
81
61.4
A11-B7
A17-B13
(
A11
B7
A17
B13
)
82
61.4
A37-B9
A42-B14
(
A37
B9
A42
B14
)
83
61.2
A74-B17
A90-B33
(
A74
B17
A90
B33
)
84
60.5
A41-B10
A47-B16
(
A41
B10
A47
B16
)
85
60.3
A63-B17
A79-B33
(
A63
B17
A79
B33
)
86
60
A19-B12
A42-B35
(
A19
B12
A42
B35
)
88
59.6
A24-B5
A31-B12
(
A24
B5
A31
B12
)
91
58.9
A63-B23
A75-B35
(
A63
B23
A75
B35
)
94
58.4
A95-B14
A101-B20
(
A95
B14
A101
B20
)
96
58.2
A58-B13
A63-B18
(
A58
B13
A63
B18
)
97
58.1
A91-B16
A103-B28
(
A91
B16
A103
B28
)
99
57.6
A103-B1
A109-B7
(
A103
B1
A109
B7
)
100
57.1
A37-B12
A45-B20
(
A37
B12
A45
B20
)
101
56.4
A17-B4
A25-B12
(
A17
B4
A25
B12
)
102
55.9
A41-B23
A46-B28
(
A41
B23
A46
B28
)
104
55.9
A80-B13
A91-B24
(
A80
B13
A91
B24
)
106
54.6
A87-B13
A94-B20
(
A87
B13
A94
B20
)
107
54.6
A113-B4
A120-B11
(
A113
B4
A120
B11
)
108
53.8
A17-B3
A43-B29
(
A17
B3
A43
B29
)
110
53.4
A111-B16
A116-B21
(
A111
B16
A116
B21
)
111
52.4
A72-B20
A78-B26
(
A72
B20
A78
B26
)
112
52.4
A76-B13
A83-B20
(
A76
B13
A83
B20
)
114
44.1
A99-B7
(
A99
B7
)
115
43.3
A15-B10
(
A15
B10
)
116
42.9
A58-B17
(
A58
B17
)
117
41.7
A99-B6
(
A99
B6
)
119
40
A35-B35
(
A35
B35
)
120
38.7
A30-B37
(
A30
B37
)
124
38.2
A120-B24
(
A120
B24
)
125
37.5
A41-B31
(
A41
B31
)
126
37.5
A67-B23
(
A67
B23
)
127
37.5
A95-B15
(
A95
B15
)
128
37.5
A113-B13
(
A113
B13
)
129
37.1
A113-B2
(
A113
B2
)
130
36.7
A28-B15
(
A28
B15
)
131
36.7
A37-B37
(
A37
B37
)
132
36.7
A120-B5
(
A120
B5
)
134
36.4
A26-B31
(
A26
B31
)
135
36.4
A32-B36
(
A32
B36
)
138
36.4
A117-B12
(
A117
B12
)
140
36.1
A41-B13
(
A41
B13
)
142
35.5
A109-B12
(
A109
B12
)
143
35.3
A41-B17
(
A41
B17
)
144
34.2
A85-B17
(
A85
B17
)
145
33.3
A11-B30
(
A11
B30
)
147
33.3
A26-B13
(
A26
B13
)
151
33.3
A95-B21
(
A95
B21
)
152
33.3
A99-B19
(
A99
B19
)
154
31.6
A52-B3
(
A52
B3
)
155
31.6
A63-B3
(
A63
B3
)
156
31.4
A113-B8
(
A113
B8
)
158
30.6
A32-B9
(
A32
B9
)
159
30.6
A37-B13
(
A37
B13
)
162
30.6
A97-B20
(
A97
B20
)
163
30.3
A19-B28
(
A19
B28
)
164
30.3
A120-B31
(
A120
B31
)
165
30
A85-B13
(
A85
B13
)
166
29.7
A32-B35
(
A32
B35
)
168
29.4
A11-B36
(
A11
B36
)
169
29.4
A63-B31
(
A63
B31
)
170
29.4
A69-B13
(
A69
B13
)
171
29.4
A99-B9
(
A99
B9
)
173
29
A106-B9
(
A106
B9
)
176
28.6
A41-B24
(
A41
B24
)
177
28.6
A99-B16
(
A99
B16
)
178
28.6
A111-B1
(
A111
B1
)
179
28.2
A28-B35
(
A28
B35
)
183
28.1
A47-B29
(
A47
B29
)
185
28.1
A58-B29
(
A58
B29
)
186
28.1
A117-B29
(
A117
B29
)
187
27.8
A11-B32
(
A11
B32
)
188
27.8
A103-B33
(
A103
B33
)
189
27.3
A120-B12
(
A120
B12
)
190
27
A19-B11
(
A19
B11
)
192
27
A115-B5
(
A115
B5
)
194
26.5
A5-B18
(
A5
B18
)
201
26.3
A11-B25
(
A11
B25
)
203
25.8
A28-B2
(
A28
B2
)
205
25.6
A30-B36
(
A30
B36
)