A=Drosophilapseudoobscura.Q28WW7, B=Ustilagomaydis.Q8NJ74, Threshold for similarity =30, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 45.3 A63-B30 ( A63 B30 )
2 43.4 A47-B30 ( A47 B30 )
3 43.4 A51-B29 ( A51 B29 )
4 43.1 A39-B28 ( A39 B28 )
5 42.0 A108-B84 ( A108 B84 )
6 41.5 A61-B28 ( A61 B28 )
7 41.2 A41-B30 ( A41 B30 )
8 41.0 A16-B5 A21-B10 A39-B28 ( A16 B5 A21 B10 A39 B28 )
9 40.4 A99-B15 ( A99 B15 )
10 40.0 A73-B29 ( A73 B29 )
11 40.0 A79-B29 ( A79 B29 )
12 40.0 A84-B28 ( A84 B28 )
13 40.0 A84-B29 ( A84 B29 )
14 40.0 A106-B82 ( A106 B82 )
15 39.2 A69-B30 A96-B57 ( A69 B30 A96 B57 )
16 39.2 A92-B85 ( A92 B85 )
17 38.9 A97-B30 ( A97 B30 )
18 38.9 A22-B11 A39-B28 ( A22 B11 A39 B28 )
19 38.6 A63-B29 ( A63 B29 )
20 38.5 A53-B85 ( A53 B85 )
21 38.5 A117-B49 ( A117 B49 )
22 38.3 A43-B86 ( A43 B86 )
23 38.2 A73-B28 A96-B51 ( A73 B28 A96 B51 )
24 38.0 A90-B29 A100-B39 ( A90 B29 A100 B39 )
25 37.7 A49-B27 ( A49 B27 )
26 37.5 A6-B17 A32-B43 ( A6 B17 A32 B43 )
27 37.5 A65-B85 ( A65 B85 )
28 37.3 A37-B74 ( A37 B74 )
29 37.3 A90-B83 ( A90 B83 )
30 36.7 A20-B3 A44-B27 A50-B33 ( A20 B3 A44 B27 A50 B33 )
31 36.5 A6-B79 ( A6 B79 )
32 36.5 A16-B38 ( A16 B38 )
33 36.5 A55-B87 ( A55 B87 )
34 36.5 A97-B1 ( A97 B1 )
35 35.9 A18-B39 A66-B87 ( A18 B39 A66 B87 )
36 35.8 A20-B62 A43-B85 ( A20 B62 A43 B85 )
37 35.8 A110-B101 ( A110 B101 )
38 35.8 A114-B45 ( A114 B45 )
39 35.6 A57-B29 A95-B67 ( A57 B29 A95 B67 )
40 35.5 A75-B30 A96-B51 ( A75 B30 A96 B51 )
41 35.3 A14-B66 ( A14 B66 )
42 35.2 A77-B87 ( A77 B87 )
43 35.2 A95-B28 ( A95 B28 )
44 35.0 A112-B44 A117-B49 ( A112 B44 A117 B49 )
45 34.9 A20-B41 A66-B87 ( A20 B41 A66 B87 )
46 34.8 A55-B28 A93-B66 ( A55 B28 A93 B66 )
47 34.6 A20-B63 A43-B86 ( A20 B63 A43 B86 )
48 34.6 A99-B17 ( A99 B17 )
49 34.6 A108-B16 ( A108 B16 )
50 34.5 A14-B36 ( A14 B36 )
51 34.5 A86-B30 ( A86 B30 )
52 34.4 A39-B29 ( A39 B29 )
53 34.4 A45-B28 A50-B33 ( A45 B28 A50 B33 )
54 34.3 A67-B28 A72-B33 A96-B57 ( A67 B28 A72 B33 A96 B57 )
55 34.2 A57-B30 A93-B66 ( A57 B30 A93 B66 )
56 34.1 A51-B28 A104-B81 ( A51 B28 A104 B81 )
57 34.0 A16-B37 A66-B87 ( A16 B37 A66 B87 )
58 34.0 A65-B69 ( A65 B69 )
59 34.0 A112-B43 ( A112 B43 )
60 33.9 A6-B24 ( A6 B24 )
61 33.6 A20-B10 A39-B29 ( A20 B10 A39 B29 )
62 33.5 A90-B30 A108-B48 ( A90 B30 A108 B48 )
63 33.4 A99-B79 A112-B92 ( A99 B79 A112 B92 )
64 33.3 A2-B1 ( A2 B1 )
65 33.3 A2-B51 ( A2 B51 )
66 33.3 A4-B3 ( A4 B3 )
67 33.3 A20-B74 A42-B96 ( A20 B74 A42 B96 )
68 33.3 A22-B4 A46-B28 ( A22 B4 A46 B28 )
69 33.3 A51-B30 ( A51 B30 )
70 33.3 A67-B88 ( A67 B88 )
71 33.3 A75-B85 ( A75 B85 )
72 33.3 A95-B97 ( A95 B97 )
73 33.3 A108-B33 ( A108 B33 )
74 33.1 A73-B7 A95-B29 A118-B52 ( A73 B7 A95 B29 A118 B52 )
75 32.8 A45-B29 ( A45 B29 )
76 32.7 A71-B27 ( A71 B27 )
77 32.7 A82-B27 ( A82 B27 )
78 32.7 A95-B29 A118-B52 ( A95 B29 A118 B52 )
79 32.7 A95-B67 ( A95 B67 )
80 32.7 A97-B51 ( A97 B51 )
81 32.7 A119-B13 ( A119 B13 )
82 32.7 A119-B14 ( A119 B14 )
83 32.6 A41-B29 A97-B85 ( A41 B29 A97 B85 )
84 32.6 A77-B17 A90-B30 A108-B48 ( A77 B17 A90 B30 A108 B48 )
85 32.6 A84-B7 A101-B24 A112-B35 ( A84 B7 A101 B24 A112 B35 )
86 32.5 A31-B26 A40-B35 A59-B54 ( A31 B26 A40 B35 A59 B54 )
87 32.4 A106-B31 A111-B36 ( A106 B31 A111 B36 )
88 32.1 A53-B31 ( A53 B31 )
89 32.1 A79-B88 ( A79 B88 )
90 32.1 A77-B2 A106-B31 A111-B36 ( A77 B2 A106 B31 A111 B36 )
91 32.0 A33-B8 ( A33 B8 )
92 32.0 A108-B48 ( A108 B48 )
93 31.9 A101-B24 A112-B35 ( A101 B24 A112 B35 )
94 31.8 A97-B31 A118-B52 ( A97 B31 A118 B52 )
95 31.8 A51-B7 A71-B27 ( A51 B7 A71 B27 )
96 31.7 A8-B81 ( A8 B81 )
97 31.7 A25-B69 ( A25 B69 )
98 31.7 A61-B29 ( A61 B29 )
99 31.7 A67-B29 ( A67 B29 )
100 31.7 A69-B29 ( A69 B29 )
101 31.7 A71-B96 ( A71 B96 )
102 31.7 A79-B28 ( A79 B28 )
103 31.7 A79-B30 ( A79 B30 )
104 31.7 A82-B96 ( A82 B96 )
105 31.7 A112-B35 ( A112 B35 )
106 31.6 A61-B27 ( A61 B27 )
107 31.6 A112-B92 ( A112 B92 )
108 31.6 A41-B36 A59-B54 ( A41 B36 A59 B54 )
109 31.5 A114-B51 ( A114 B51 )
110 31.4 A88-B2 ( A88 B2 )
111 31.4 A97-B85 ( A97 B85 )
112 31.4 A104-B81 ( A104 B81 )
113 31.1 A8-B82 ( A8 B82 )
114 31.1 A22-B67 ( A22 B67 )
115 31.0 A6-B85 ( A6 B85 )
116 31.0 A57-B88 ( A57 B88 )
117 31.0 A117-B36 ( A117 B36 )
118 31.0 A84-B30 A91-B37 ( A84 B30 A91 B37 )
119 30.9 A43-B85 ( A43 B85 )
120 30.9 A75-B31 ( A75 B31 )
121 30.9 A86-B31 ( A86 B31 )
122 30.8 A73-B30 ( A73 B30 )
123 30.6 A92-B9 A114-B31 ( A92 B9 A114 B31 )
124 30.6 A57-B28 ( A57 B28 )
125 30.4 A59-B54 ( A59 B54 )
126 30.4 A90-B88 ( A90 B88 )
127 30.4 A108-B34 ( A108 B34 )
128 30.4 A110-B86 ( A110 B86 )
129 30.4 A114-B31 ( A114 B31 )