A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =30, length of fragment = 30, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
2 51.3 A3-B3 A9-B9 A14-B14 ( A3 B3 A9 B9 A14 B14 )
3 50.2 A5-B5 A10-B10 A15-B15 ( A5 B5 A10 B10 A15 B15 )
6 47.8 A9-B9 A14-B14 ( A9 B9 A14 B14 )
8 46.0 A45-B12 A50-B17 ( A45 B12 A50 B17 )
9 44.2 A7-B7 A12-B12 A17-B17 ( A7 B7 A12 B12 A17 B17 )
14 41.9 A7-B20 ( A7 B20 )
15 41.5 A41-B20 A54-B33 ( A41 B20 A54 B33 )
16 40.6 A5-B18 ( A5 B18 )
19 40.0 A39-B13 ( A39 B13 )
26 37.5 A35-B7 ( A35 B7 )
29 36.4 A27-B14 ( A27 B14 )
32 35.5 A27-B20 A47-B40 ( A27 B20 A47 B40 )
39 34.7 A1-B7 A14-B20 A24-B30 ( A1 B7 A14 B20 A24 B30 )
40 34.7 A7-B12 A20-B25 A33-B38 ( A7 B12 A20 B25 A33 B38 )
42 33.4 A1-B8 A10-B17 A25-B32 ( A1 B8 A10 B17 A25 B32 )
51 32.7 A31-B9 A38-B16 A46-B24 A54-B32 ( A31 B9 A38 B16 A46 B24 A54 B32 )
55 32.4 A9-B13 A14-B18 ( A9 B13 A14 B18 )
60 31.8 A35-B12 A46-B23 ( A35 B12 A46 B23 )
61 31.8 A51-B5 A57-B11 ( A51 B5 A57 B11 )
62 31.5 A37-B16 A54-B33 ( A37 B16 A54 B33 )
65 31.4 A37-B8 ( A37 B8 )
74 31.2 A57-B11 ( A57 B11 )