A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =30, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
166.3
A5-B3
A13-B11
A18-B16
A27-B25
A37-B35
(
A5
B3
A13
B11
A18
B16
A27
B25
A37
B35
)
2
166.3
A7-B5
A13-B11
A18-B16
A27-B25
A37-B35
(
A7
B5
A13
B11
A18
B16
A27
B25
A37
B35
)
3
137.4
A73-B3
A85-B15
A92-B22
A99-B29
(
A73
B3
A85
B15
A92
B22
A99
B29
)
4
133
A23-B5
A30-B12
A38-B20
A43-B25
(
A23
B5
A30
B12
A38
B20
A43
B25
)
6
129.2
A15-B13
A22-B20
A27-B25
A37-B35
(
A15
B13
A22
B20
A27
B25
A37
B35
)
7
128.7
A45-B4
A51-B10
A57-B16
A67-B26
(
A45
B4
A51
B10
A57
B16
A67
B26
)
8
128.6
A31-B1
A39-B9
A46-B16
A51-B21
(
A31
B1
A39
B9
A46
B16
A51
B21
)
9
127.3
A71-B1
A85-B15
A92-B22
A99-B29
(
A71
B1
A85
B15
A92
B22
A99
B29
)
10
126.9
A17-B15
A22-B20
A27-B25
A37-B35
(
A17
B15
A22
B20
A27
B25
A37
B35
)
11
124.8
A11-B1
A23-B13
A30-B20
A41-B31
(
A11
B1
A23
B13
A30
B20
A41
B31
)
12
123.2
A15-B5
A23-B13
A30-B20
A41-B31
(
A15
B5
A23
B13
A30
B20
A41
B31
)
13
116.1
A73-B2
A98-B27
A103-B32
(
A73
B2
A98
B27
A103
B32
)
14
112.5
A77-B1
A94-B18
A102-B26
(
A77
B1
A94
B18
A102
B26
)
15
111.9
A45-B3
A57-B15
A76-B34
(
A45
B3
A57
B15
A76
B34
)
16
111.3
A89-B2
A97-B10
A106-B19
(
A89
B2
A97
B10
A106
B19
)
17
110.9
A79-B3
A94-B18
A102-B26
(
A79
B3
A94
B18
A102
B26
)
18
110.1
A57-B4
A68-B15
A88-B35
(
A57
B4
A68
B15
A88
B35
)
19
108.1
A81-B5
A94-B18
A102-B26
(
A81
B5
A94
B18
A102
B26
)
20
107.3
A85-B4
A94-B13
A108-B27
(
A85
B4
A94
B13
A108
B27
)
21
105.4
A23-B23
A28-B28
A35-B35
(
A23
B23
A28
B28
A35
B35
)
22
104.9
A67-B3
A79-B15
A93-B29
(
A67
B3
A79
B15
A93
B29
)
23
104.5
A75-B13
A80-B18
A85-B23
(
A75
B13
A80
B18
A85
B23
)
24
104.2
A83-B2
A94-B13
A108-B27
(
A83
B2
A94
B13
A108
B27
)
25
103.1
A41-B12
A49-B20
A54-B25
(
A41
B12
A49
B20
A54
B25
)
26
101.6
A65-B1
A79-B15
A93-B29
(
A65
B1
A79
B15
A93
B29
)
27
100.9
A21-B21
A28-B28
A35-B35
(
A21
B21
A28
B28
A35
B35
)
28
100.7
A79-B4
A90-B15
A99-B24
(
A79
B4
A90
B15
A99
B24
)
29
99.2
A13-B12
A21-B20
A26-B25
(
A13
B12
A21
B20
A26
B25
)
30
99
A37-B3
A44-B10
A59-B25
(
A37
B3
A44
B10
A59
B25
)
31
98.9
A31-B3
A39-B11
A54-B26
(
A31
B3
A39
B11
A54
B26
)
33
98.4
A75-B12
A85-B22
A95-B32
(
A75
B12
A85
B22
A95
B32
)
34
97.8
A79-B16
A85-B22
A95-B32
(
A79
B16
A85
B22
A95
B32
)
37
96.4
A73-B11
A80-B18
A85-B23
(
A73
B11
A80
B18
A85
B23
)
38
95.8
A19-B17
A27-B25
A37-B35
(
A19
B17
A27
B25
A37
B35
)
39
95.8
A37-B4
A53-B20
A61-B28
(
A37
B4
A53
B20
A61
B28
)
40
94.5
A77-B2
A90-B15
A99-B24
(
A77
B2
A90
B15
A99
B24
)
42
82.2
A41-B4
A63-B26
(
A41
B4
A63
B26
)
43
82.1
A67-B2
A93-B28
(
A67
B2
A93
B28
)
44
75.2
A51-B2
A77-B28
(
A51
B2
A77
B28
)
45
75.2
A63-B3
A88-B28
(
A63
B3
A88
B28
)
46
75.1
A51-B16
A65-B30
(
A51
B16
A65
B30
)
47
74.8
A39-B2
A63-B26
(
A39
B2
A63
B26
)
48
73.8
A41-B5
A51-B15
(
A41
B5
A51
B15
)
49
73.5
A69-B4
A93-B28
(
A69
B4
A93
B28
)
50
73.2
A21-B1
A55-B35
(
A21
B1
A55
B35
)
51
73
A9-B14
A24-B29
(
A9
B14
A24
B29
)
52
72.9
A39-B8
A46-B15
(
A39
B8
A46
B15
)
53
72.6
A9-B15
A27-B33
(
A9
B15
A27
B33
)
54
72.6
A73-B4
A83-B14
(
A73
B4
A83
B14
)
55
72.1
A61-B3
A72-B14
(
A61
B3
A72
B14
)
56
71.7
A61-B2
A74-B15
(
A61
B2
A74
B15
)
58
70.7
A61-B1
A88-B28
(
A61
B1
A88
B28
)
59
70.4
A57-B3
A89-B35
(
A57
B3
A89
B35
)
60
70.2
A95-B19
A102-B26
(
A95
B19
A102
B26
)
61
70.2
A111-B6
A120-B15
(
A111
B6
A120
B15
)
62
70.1
A25-B25
A35-B35
(
A25
B25
A35
B35
)
63
69.9
A51-B4
A64-B17
(
A51
B4
A64
B17
)
64
69.5
A3-B15
A9-B21
(
A3
B15
A9
B21
)
65
69.5
A71-B20
A76-B25
(
A71
B20
A76
B25
)
66
69.4
A85-B11
A91-B17
(
A85
B11
A91
B17
)
67
69.4
A89-B1
A99-B11
(
A89
B1
A99
B11
)
68
69.3
A95-B4
A113-B22
(
A95
B4
A113
B22
)
69
69.2
A39-B3
A51-B15
(
A39
B3
A51
B15
)
71
68.9
A63-B4
A74-B15
(
A63
B4
A74
B15
)
73
68.3
A99-B12
A106-B19
(
A99
B12
A106
B19
)
74
67.9
A45-B2
A78-B35
(
A45
B2
A78
B35
)
75
67.8
A11-B26
A20-B35
(
A11
B26
A20
B35
)
76
67.8
A101-B30
A106-B35
(
A101
B30
A106
B35
)
77
67.8
A107-B5
A112-B10
(
A107
B5
A112
B10
)
78
67.7
A67-B1
A94-B28
(
A67
B1
A94
B28
)
79
67.7
A97-B6
A113-B22
(
A97
B6
A113
B22
)
80
67.3
A101-B4
A106-B9
(
A101
B4
A106
B9
)
81
67.1
A39-B21
A45-B27
(
A39
B21
A45
B27
)
82
66.8
A105-B3
A111-B9
(
A105
B3
A111
B9
)
83
66.8
A13-B2
A28-B17
(
A13
B2
A28
B17
)
84
66.7
A59-B5
A89-B35
(
A59
B5
A89
B35
)
85
66.7
A37-B13
A53-B29
(
A37
B13
A53
B29
)
87
66.5
A21-B8
A26-B13
(
A21
B8
A26
B13
)
88
66.3
A95-B14
A108-B27
(
A95
B14
A108
B27
)
89
66.2
A69-B18
A74-B23
(
A69
B18
A74
B23
)
91
66
A89-B3
A114-B28
(
A89
B3
A114
B28
)
92
65.7
A85-B13
A101-B29
(
A85
B13
A101
B29
)
93
65.6
A47-B4
A78-B35
(
A47
B4
A78
B35
)
94
65.6
A55-B1
A89-B35
(
A55
B1
A89
B35
)
95
65.5
A51-B22
A56-B27
(
A51
B22
A56
B27
)
96
65.5
A95-B1
A114-B20
(
A95
B1
A114
B20
)
99
64.3
A97-B3
A114-B20
(
A97
B3
A114
B20
)
100
64
A21-B4
A38-B21
(
A21
B4
A38
B21
)
101
64
A57-B2
A75-B20
(
A57
B2
A75
B20
)
102
63.9
A3-B13
A24-B34
(
A3
B13
A24
B34
)
103
63.9
A15-B24
A25-B34
(
A15
B24
A25
B34
)
104
63.9
A111-B8
A119-B16
(
A111
B8
A119
B16
)
106
63.4
A15-B23
A27-B35
(
A15
B23
A27
B35
)
108
63.4
A73-B22
A78-B27
(
A73
B22
A78
B27
)
109
63.2
A105-B6
A111-B12
(
A105
B6
A111
B12
)
111
63
A69-B13
A81-B25
(
A69
B13
A81
B25
)
112
62.8
A93-B18
A99-B24
(
A93
B18
A99
B24
)
113
62.4
A7-B22
A20-B35
(
A7
B22
A20
B35
)
114
62.3
A53-B21
A67-B35
(
A53
B21
A67
B35
)
115
62.2
A25-B8
A38-B21
(
A25
B8
A38
B21
)
116
62.1
A19-B28
A25-B34
(
A19
B28
A25
B34
)
117
61.7
A29-B27
A37-B35
(
A29
B27
A37
B35
)
118
61.7
A87-B1
A114-B28
(
A87
B1
A114
B28
)
119
61.5
A9-B13
A26-B30
(
A9
B13
A26
B30
)
120
61.2
A1-B11
A24-B34
(
A1
B11
A24
B34
)
121
49.1
A97-B5
(
A97
B5
)
122
46.4
A97-B4
(
A97
B4
)
123
43.6
A113-B2
(
A113
B2
)
124
42.6
A41-B3
(
A41
B3
)
125
42.4
A55-B32
(
A55
B32
)
127
42.1
A51-B3
(
A51
B3
)
128
42.1
A91-B13
(
A91
B13
)
129
41.8
A75-B17
(
A75
B17
)
131
41.4
A73-B16
(
A73
B16
)
132
41
A95-B3
(
A95
B3
)
133
40.7
A85-B16
(
A85
B16
)
134
40
A77-B26
(
A77
B26
)
135
40
A85-B17
(
A85
B17
)
136
40
A111-B1
(
A111
B1
)
137
39.7
A97-B17
(
A97
B17
)
138
39.7
A107-B10
(
A107
B10
)
139
39.3
A25-B12
(
A25
B12
)
140
39.3
A55-B26
(
A55
B26
)
142
38.6
A85-B3
(
A85
B3
)
144
38.1
A93-B19
(
A93
B19
)
145
37.9
A7-B35
(
A7
B35
)
146
37.9
A83-B1
(
A83
B1
)
147
37.3
A29-B28
(
A29
B28
)
148
37
A27-B14
(
A27
B14
)
150
36.4
A113-B3
(
A113
B3
)
151
36.2
A47-B17
(
A47
B17
)
152
36.2
A118-B23
(
A118
B23
)
154
36.1
A103-B27
(
A103
B27
)
155
36.1
A109-B11
(
A109
B11
)
156
35.8
A9-B25
(
A9
B25
)
157
35.7
A31-B10
(
A31
B10
)
159
35.6
A17-B2
(
A17
B2
)
160
35.6
A29-B18
(
A29
B18
)
161
35.6
A53-B24
(
A53
B24
)
162
35.6
A75-B24
(
A75
B24
)
163
35.5
A103-B28
(
A103
B28
)
164
35
A41-B23
(
A41
B23
)
165
35
A49-B1
(
A49
B1
)
166
35
A83-B21
(
A83
B21
)
167
34.9
A27-B26
(
A27
B26
)
168
34.6
A35-B10
(
A35
B10
)
170
34.5
A83-B15
(
A83
B15
)
171
34.4
A25-B30
(
A25
B30
)
172
34.4
A39-B35
(
A39
B35
)
173
33.9
A23-B7
(
A23
B7
)
175
33.9
A109-B7
(
A109
B7
)
177
33.9
A120-B24
(
A120
B24
)
178
33.3
A27-B34
(
A27
B34
)
180
33.3
A93-B13
(
A93
B13
)
182
33.3
A115-B20
(
A115
B20
)
183
32.8
A19-B3
(
A19
B3
)
188
32.8
A73-B15
(
A73
B15
)
192
32.8
A118-B14
(
A118
B14
)
193
32.8
A120-B11
(
A120
B11
)
194
32.7
A37-B12
(
A37
B12
)
195
32.3
A79-B2
(
A79
B2
)
196
32.3
A107-B9
(
A107
B9
)
197
32.2
A3-B32
(
A3
B32
)
202
32.2
A109-B8
(
A109
B8
)
203
32.2
A113-B13
(
A113
B13
)
204
31.7
A33-B12
(
A33
B12
)
205
31.7
A39-B22
(
A39
B22
)
207
31.7
A67-B27
(
A67
B27
)
210
31.7
A95-B16
(
A95
B16
)
211
31.7
A101-B31
(
A101
B31
)
212
31.7
A115-B21
(
A115
B21
)
214
31.4
A118-B3
(
A118
B3
)
215
31.3
A87-B25
(
A87
B25
)
216
31.3
A113-B23
(
A113
B23
)
217
31.2
A53-B5
(
A53
B5
)
219
31.1
A77-B25
(
A77
B25
)
222
31.1
A120-B17
(
A120
B17
)
223
31
A17-B10
(
A17
B10
)
225
30.8
A7-B23
(
A7
B23
)
226
30.8
A11-B30
(
A11
B30
)
228
30.8
A101-B8
(
A101
B8
)
229
30.8
A113-B1
(
A113
B1
)
232
30.6
A87-B5
(
A87
B5
)
233
30.6
A109-B22
(
A109
B22
)
234
30.6
A120-B16
(
A120
B16
)
235
30.4
A9-B23
(
A9
B23
)
236
30.3
A39-B12
(
A39
B12
)
237
30.3
A109-B12
(
A109
B12
)
238
30.3
A111-B10
(
A111
B10
)
240
30.2
A71-B14
(
A71
B14
)