A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =30, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
175.2
A7-B5
A13-B11
A20-B18
A30-B28
A38-B36
(
A7
B5
A13
B11
A20
B18
A30
B28
A38
B36
)
2
175
A3-B1
A13-B11
A20-B18
A30-B28
A38-B36
(
A3
B1
A13
B11
A20
B18
A30
B28
A38
B36
)
3
175
A5-B3
A13-B11
A20-B18
A30-B28
A38-B36
(
A5
B3
A13
B11
A20
B18
A30
B28
A38
B36
)
4
174.6
A25-B7
A30-B12
A39-B21
A44-B26
A53-B35
(
A25
B7
A30
B12
A39
B21
A44
B26
A53
B35
)
5
172.8
A47-B5
A58-B16
A66-B24
A72-B30
A78-B36
(
A47
B5
A58
B16
A66
B24
A72
B30
A78
B36
)
6
153
A15-B13
A20-B18
A30-B28
A38-B36
(
A15
B13
A20
B18
A30
B28
A38
B36
)
7
149.9
A25-B5
A37-B17
A50-B30
A57-B37
(
A25
B5
A37
B17
A50
B30
A57
B37
)
8
149.7
A41-B7
A46-B12
A53-B19
A58-B24
(
A41
B7
A46
B12
A53
B19
A58
B24
)
9
149.4
A52-B4
A61-B13
A66-B18
A77-B29
(
A52
B4
A61
B13
A66
B18
A77
B29
)
10
146.6
A5-B4
A21-B20
A26-B25
A35-B34
(
A5
B4
A21
B20
A26
B25
A35
B34
)
11
146.2
A23-B3
A37-B17
A50-B30
A57-B37
(
A23
B3
A37
B17
A50
B30
A57
B37
)
12
145.5
A58-B4
A74-B20
A83-B29
A91-B37
(
A58
B4
A74
B20
A83
B29
A91
B37
)
14
143.2
A80-B4
A93-B17
A99-B23
A104-B28
(
A80
B4
A93
B17
A99
B23
A104
B28
)
15
143.1
A29-B11
A39-B21
A44-B26
A53-B35
(
A29
B11
A39
B21
A44
B26
A53
B35
)
16
143
A21-B1
A37-B17
A50-B30
A57-B37
(
A21
B1
A37
B17
A50
B30
A57
B37
)
17
141.3
A39-B5
A46-B12
A53-B19
A58-B24
(
A39
B5
A46
B12
A53
B19
A58
B24
)
18
141.2
A11-B1
A17-B7
A23-B13
A41-B31
(
A11
B1
A17
B7
A23
B13
A41
B31
)
19
140.6
A74-B12
A83-B21
A88-B26
A96-B34
(
A74
B12
A83
B21
A88
B26
A96
B34
)
20
139.7
A47-B4
A63-B20
A72-B29
A80-B37
(
A47
B4
A63
B20
A72
B29
A80
B37
)
22
136.7
A78-B2
A93-B17
A99-B23
A104-B28
(
A78
B2
A93
B17
A99
B23
A104
B28
)
23
136.3
A58-B5
A69-B16
A83-B30
A89-B36
(
A58
B5
A69
B16
A83
B30
A89
B36
)
24
136.2
A76-B14
A83-B21
A88-B26
A96-B34
(
A76
B14
A83
B21
A88
B26
A96
B34
)
25
134.1
A74-B11
A80-B17
A88-B25
A98-B35
(
A74
B11
A80
B17
A88
B25
A98
B35
)
26
130
A50-B2
A61-B13
A66-B18
A77-B29
(
A50
B2
A61
B13
A66
B18
A77
B29
)
27
129.8
A33-B4
A40-B11
A51-B22
A56-B27
(
A33
B4
A40
B11
A51
B22
A56
B27
)
28
129.5
A9-B17
A15-B23
A27-B35
(
A9
B17
A15
B23
A27
B35
)
29
128.6
A19-B10
A24-B15
A36-B27
A46-B37
(
A19
B10
A24
B15
A36
B27
A46
B37
)
30
120.6
A91-B4
A98-B11
A117-B30
(
A91
B4
A98
B11
A117
B30
)
31
120.5
A11-B16
A17-B22
A26-B31
(
A11
B16
A17
B22
A26
B31
)
32
119.8
A9-B14
A17-B22
A26-B31
(
A9
B14
A17
B22
A26
B31
)
33
116.9
A69-B4
A85-B20
A94-B29
(
A69
B4
A85
B20
A94
B29
)
34
115.9
A89-B2
A98-B11
A117-B30
(
A89
B2
A98
B11
A117
B30
)
36
112.7
A47-B13
A53-B19
A58-B24
(
A47
B13
A53
B19
A58
B24
)
37
110.4
A67-B2
A85-B20
A94-B29
(
A67
B2
A85
B20
A94
B29
)
38
109.6
A17-B13
A24-B20
A32-B28
(
A17
B13
A24
B20
A32
B28
)
40
108.3
A5-B15
A20-B30
A26-B36
(
A5
B15
A20
B30
A26
B36
)
41
108.3
A69-B13
A79-B23
A90-B34
(
A69
B13
A79
B23
A90
B34
)
43
107.7
A13-B3
A23-B13
A41-B31
(
A13
B3
A23
B13
A41
B31
)
44
107.7
A74-B3
A101-B30
A108-B37
(
A74
B3
A101
B30
A108
B37
)
45
107.3
A23-B23
A31-B31
A37-B37
(
A23
B23
A31
B31
A37
B37
)
47
106.9
A7-B4
A14-B11
A38-B35
(
A7
B4
A14
B11
A38
B35
)
48
106.9
A41-B23
A46-B28
A53-B35
(
A41
B23
A46
B28
A53
B35
)
49
106.8
A41-B10
A47-B16
A67-B36
(
A41
B10
A47
B16
A67
B36
)
50
106.2
A74-B4
A94-B24
A101-B31
(
A74
B4
A94
B24
A101
B31
)
51
105.8
A5-B14
A11-B20
A16-B25
(
A5
B14
A11
B20
A16
B25
)
52
105.5
A11-B5
A25-B19
A41-B35
(
A11
B5
A25
B19
A41
B35
)
53
105.3
A87-B7
A95-B15
A106-B26
(
A87
B7
A95
B15
A106
B26
)
54
104.8
A63-B11
A69-B17
A77-B25
(
A63
B11
A69
B17
A77
B25
)
55
104.5
A85-B3
A98-B16
A110-B28
(
A85
B3
A98
B16
A110
B28
)
56
104.1
A72-B1
A101-B30
A108-B37
(
A72
B1
A101
B30
A108
B37
)
57
103.9
A41-B12
A51-B22
A56-B27
(
A41
B12
A51
B22
A56
B27
)
59
102.3
A76-B7
A83-B14
A94-B25
(
A76
B7
A83
B14
A94
B25
)
62
101.2
A52-B20
A64-B32
A69-B37
(
A52
B20
A64
B32
A69
B37
)
63
101
A23-B1
A30-B8
A41-B19
(
A23
B1
A30
B8
A41
B19
)
64
100.9
A83-B1
A98-B16
A110-B28
(
A83
B1
A98
B16
A110
B28
)
65
100.7
A41-B5
A50-B14
A56-B20
(
A41
B5
A50
B14
A56
B20
)
66
100.3
A39-B8
A47-B16
A67-B36
(
A39
B8
A47
B16
A67
B36
)
67
99.9
A85-B17
A91-B23
A98-B30
(
A85
B17
A91
B23
A98
B30
)
68
99.7
A25-B25
A31-B31
A37-B37
(
A25
B25
A31
B31
A37
B37
)
70
98
A54-B14
A62-B22
A67-B27
(
A54
B14
A62
B22
A67
B27
)
72
97.1
A43-B14
A51-B22
A56-B27
(
A43
B14
A51
B22
A56
B27
)
73
96.5
A76-B22
A83-B29
A91-B37
(
A76
B22
A83
B29
A91
B37
)
76
95.6
A76-B13
A88-B25
A98-B35
(
A76
B13
A88
B25
A98
B35
)
77
95.5
A63-B13
A75-B25
A86-B36
(
A63
B13
A75
B25
A86
B36
)
78
92.6
A41-B4
A65-B28
(
A41
B4
A65
B28
)
79
88.2
A63-B4
A94-B35
(
A63
B4
A94
B35
)
81
84.9
A43-B6
A65-B28
(
A43
B6
A65
B28
)
82
84.8
A97-B3
A115-B21
(
A97
B3
A115
B21
)
84
83.1
A85-B4
A94-B13
(
A85
B4
A94
B13
)
85
82.3
A85-B16
A94-B25
(
A85
B16
A94
B25
)
86
81.4
A95-B20
A103-B28
(
A95
B20
A103
B28
)
87
78.8
A107-B11
A120-B24
(
A107
B11
A120
B24
)
89
77
A37-B20
A53-B36
(
A37
B20
A53
B36
)
90
76.6
A85-B12
A103-B30
(
A85
B12
A103
B30
)
91
76.5
A58-B13
A68-B23
(
A58
B13
A68
B23
)
93
75.5
A47-B24
A55-B32
(
A47
B24
A55
B32
)
94
74.8
A85-B11
A91-B17
(
A85
B11
A91
B17
)
95
74.3
A33-B5
A40-B12
(
A33
B5
A40
B12
)
96
74.1
A80-B13
A90-B23
(
A80
B13
A90
B23
)
97
74
A1-B17
A20-B36
(
A1
B17
A20
B36
)
99
73.8
A52-B11
A57-B16
(
A52
B11
A57
B16
)
101
72.5
A37-B4
A61-B28
(
A37
B4
A61
B28
)
102
72.3
A99-B6
A118-B25
(
A99
B6
A118
B25
)
103
72.2
A33-B12
A41-B20
(
A33
B12
A41
B20
)
104
72.2
A87-B14
A103-B30
(
A87
B14
A103
B30
)
105
71.2
A50-B1
A81-B32
(
A50
B1
A81
B32
)
107
70.7
A99-B12
A117-B30
(
A99
B12
A117
B30
)
108
70.6
A72-B21
A77-B26
(
A72
B21
A77
B26
)
110
70.6
A115-B2
A120-B7
(
A115
B2
A120
B7
)
111
70.4
A31-B1
A46-B16
(
A31
B1
A46
B16
)
112
70.1
A52-B3
A81-B32
(
A52
B3
A81
B32
)
115
69.8
A31-B19
A47-B35
(
A31
B19
A47
B35
)
116
69.4
A52-B17
A58-B23
(
A52
B17
A58
B23
)
118
68.9
A37-B12
A45-B20
(
A37
B12
A45
B20
)
119
68.9
A39-B2
A65-B28
(
A39
B2
A65
B28
)
120
68.8
A61-B2
A94-B35
(
A61
B2
A94
B35
)
123
68.4
A41-B3
A70-B32
(
A41
B3
A70
B32
)
125
68.3
A74-B17
A80-B23
(
A74
B17
A80
B23
)
126
67.9
A33-B3
A46-B16
(
A33
B3
A46
B16
)
128
67.7
A23-B15
A36-B28
(
A23
B15
A36
B28
)
129
67.7
A101-B2
A107-B8
(
A101
B2
A107
B8
)
130
67.6
A43-B5
A70-B32
(
A43
B5
A70
B32
)
131
67.6
A87-B13
A93-B19
(
A87
B13
A93
B19
)
132
67.6
A95-B25
A101-B31
(
A95
B25
A101
B31
)
133
67.5
A41-B17
A47-B23
(
A41
B17
A47
B23
)
134
67.5
A87-B25
A96-B34
(
A87
B25
A96
B34
)
135
67.4
A63-B17
A69-B23
(
A63
B17
A69
B23
)
136
66.9
A31-B5
A38-B12
(
A31
B5
A38
B12
)
137
66.9
A99-B2
A107-B10
(
A99
B2
A107
B10
)
138
66.9
A113-B10
A119-B16
(
A113
B10
A119
B16
)
139
66.7
A105-B3
A112-B10
(
A105
B3
A112
B10
)
140
66.7
A91-B16
A103-B28
(
A91
B16
A103
B28
)
141
66.6
A99-B19
A106-B26
(
A99
B19
A106
B26
)
142
65.9
A31-B10
A41-B20
(
A31
B10
A41
B20
)
145
65
A103-B5
A109-B11
(
A103
B5
A109
B11
)
146
64.9
A3-B15
A9-B21
(
A3
B15
A9
B21
)
147
64.9
A87-B22
A94-B29
(
A87
B22
A94
B29
)
148
64.8
A52-B13
A75-B36
(
A52
B13
A75
B36
)
149
64.7
A29-B28
A35-B34
(
A29
B28
A35
B34
)
150
64.7
A45-B27
A53-B35
(
A45
B27
A53
B35
)
151
64.7
A103-B2
A110-B9
(
A103
B2
A110
B9
)
152
63.9
A37-B13
A47-B23
(
A37
B13
A47
B23
)
153
63.2
A9-B15
A29-B35
(
A9
B15
A29
B35
)
155
63.2
A80-B16
A99-B35
(
A80
B16
A99
B35
)
157
63
A103-B32
A108-B37
(
A103
B32
A108
B37
)
158
63
A105-B4
A110-B9
(
A105
B4
A110
B9
)
160
61.2
A25-B14
A30-B19
(
A25
B14
A30
B19
)
161
51.4
A97-B5
(
A97
B5
)
162
47.1
A39-B36
(
A39
B36
)
163
45.5
A109-B12
(
A109
B12
)
165
44.4
A41-B13
(
A41
B13
)
166
44.1
A35-B35
(
A35
B35
)
167
44.1
A99-B7
(
A99
B7
)
168
43.8
A65-B19
(
A65
B19
)
169
43.8
A74-B16
(
A74
B16
)
170
43.3
A27-B14
(
A27
B14
)
171
43.2
A11-B26
(
A11
B26
)
172
42.9
A47-B17
(
A47
B17
)
173
42.9
A58-B17
(
A58
B17
)
176
40.6
A121-B13
(
A121
B13
)
177
40.5
A115-B24
(
A115
B24
)
178
40
A121-B17
(
A121
B17
)
179
39.4
A31-B35
(
A31
B35
)
180
38.5
A115-B25
(
A115
B25
)
181
38.2
A11-B30
(
A11
B30
)
182
38.2
A52-B16
(
A52
B16
)
183
37.8
A1-B12
(
A1
B12
)
185
37.5
A67-B23
(
A67
B23
)
186
37.5
A95-B29
(
A95
B29
)
187
37.5
A113-B13
(
A113
B13
)
190
37.1
A113-B2
(
A113
B2
)
191
37.1
A121-B18
(
A121
B18
)
192
36.8
A9-B24
(
A9
B24
)
194
36.4
A11-B37
(
A11
B37
)
195
36.4
A13-B8
(
A13
B8
)
199
36.1
A25-B12
(
A25
B12
)
200
36.1
A29-B36
(
A29
B36
)
201
36.1
A63-B16
(
A63
B16
)
203
36.1
A119-B15
(
A119
B15
)
205
35.3
A19-B28
(
A19
B28
)
206
35.3
A61-B1
(
A61
B1
)
207
35.1
A76-B25
(
A76
B25
)
208
35
A27-B32
(
A27
B32
)
210
34.4
A67-B30
(
A67
B30
)
212
34.3
A58-B35
(
A58
B35
)
215
34.3
A105-B34
(
A105
B34
)
216
34.2
A9-B33
(
A9
B33
)
217
34.2
A63-B3
(
A63
B3
)
218
34.2
A91-B13
(
A91
B13
)
219
34.2
A119-B2
(
A119
B2
)
223
33.3
A15-B24
(
A15
B24
)
224
33.3
A19-B12
(
A19
B12
)
225
33.3
A39-B24
(
A39
B24
)
226
33.3
A41-B16
(
A41
B16
)
228
33.3
A54-B18
(
A54
B18
)
232
33.3
A111-B6
(
A111
B6
)
233
33.3
A119-B1
(
A119
B1
)
234
32.5
A9-B37
(
A9
B37
)
235
32.5
A95-B21
(
A95
B21
)
236
32.4
A5-B28
(
A5
B28
)
237
32.4
A29-B16
(
A29
B16
)
241
32.4
A72-B14
(
A72
B14
)
244
32.4
A111-B10
(
A111
B10
)
245
32.4
A119-B6
(
A119
B6
)
246
32.3
A101-B18
(
A101
B18
)
247
31.7
A11-B25
(
A11
B25
)
248
31.7
A29-B37
(
A29
B37
)
251
31.6
A95-B30
(
A95
B30
)
253
31.4
A31-B12
(
A31
B12
)
258
31.4
A61-B14
(
A61
B14
)
260
31.4
A78-B27
(
A78
B27
)
261
31.4
A109-B24
(
A109
B24
)
262
31.4
A113-B8
(
A113
B8
)
265
30.8
A121-B25
(
A121
B25
)
266
30.8
A121-B26
(
A121
B26
)
267
30.6
A5-B18
(
A5
B18
)
268
30.6
A19-B37
(
A19
B37
)
269
30.6
A54-B25
(
A54
B25
)
270
30.6
A76-B34
(
A76
B34
)
271
30.6
A87-B34
(
A87
B34
)
273
30.6
A97-B20
(
A97
B20
)
274
30.3
A119-B9
(
A119
B9
)