A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =25, length of fragment = 50, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
2
50.9
A5-B5
A10-B10
A15-B15
(
A5
B5
A10
B10
A15
B15
)
3
50.5
A1-B1
A6-B6
A11-B11
A16-B16
(
A1
B1
A6
B6
A11
B11
A16
B16
)
6
46.5
A3-B3
A8-B8
A13-B13
A18-B18
(
A3
B3
A8
B8
A13
B13
A18
B18
)
8
45.3
A7-B7
A12-B12
A17-B17
(
A7
B7
A12
B12
A17
B17
)
9
43.1
A39-B18
(
A39
B18
)
19
38.1
A1-B2
A6-B7
A11-B12
A16-B17
(
A1
B2
A6
B7
A11
B12
A16
B17
)
21
37.2
A5-B6
A10-B11
A15-B16
(
A5
B6
A10
B11
A15
B16
)
22
37.0
A5-B18
A16-B29
(
A5
B18
A16
B29
)
25
35.6
A31-B9
A38-B16
(
A31
B9
A38
B16
)
29
34.8
A3-B4
A8-B9
A13-B14
A18-B19
(
A3
B4
A8
B9
A13
B14
A18
B19
)
31
34.5
A5-B17
(
A5
B17
)
35
34.0
A7-B8
A12-B13
A17-B18
(
A7
B8
A12
B13
A17
B18
)
42
32.8
A25-B12
(
A25
B12
)
49
32.4
A3-B2
A8-B7
A13-B12
A18-B17
(
A3
B2
A8
B7
A13
B12
A18
B17
)
50
32.2
A39-B19
(
A39
B19
)
51
31.8
A7-B6
A12-B11
A17-B16
(
A7
B6
A12
B11
A17
B16
)
56
30.8
A21-B1
A39-B19
(
A21
B1
A39
B19
)
58
30.6
A5-B19
A14-B28
A19-B33
(
A5
B19
A14
B28
A19
B33
)
62
29.5
A15-B3
A25-B13
(
A15
B3
A25
B13
)
74
27.4
A3-B16
A16-B29
(
A3
B16
A16
B29
)
77
27.4
A39-B16
(
A39
B16
)
81
27.3
A39-B17
(
A39
B17
)
91
26.3
A25-B13
(
A25
B13
)