A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =25, length of fragment = 50, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 202.2 A1-B1 A6-B6 A11-B11 A16-B16 ( A1 B1 A6 B6 A11 B11 A16 B16 )
2 185.9 A3-B3 A8-B8 A13-B13 A18-B18 ( A3 B3 A8 B8 A13 B13 A18 B18 )
3 152.7 A5-B5 A10-B10 A15-B15 ( A5 B5 A10 B10 A15 B15 )
4 152.6 A1-B2 A6-B7 A11-B12 A16-B17 ( A1 B2 A6 B7 A11 B12 A16 B17 )
5 139.3 A3-B4 A8-B9 A13-B14 A18-B19 ( A3 B4 A8 B9 A13 B14 A18 B19 )
6 135.9 A7-B7 A12-B12 A17-B17 ( A7 B7 A12 B12 A17 B17 )
7 129.7 A3-B2 A8-B7 A13-B12 A18-B17 ( A3 B2 A8 B7 A13 B12 A18 B17 )
8 111.7 A5-B6 A10-B11 A15-B16 ( A5 B6 A10 B11 A15 B16 )
10 101.9 A7-B8 A12-B13 A17-B18 ( A7 B8 A12 B13 A17 B18 )
12 95.4 A7-B6 A12-B11 A17-B16 ( A7 B6 A12 B11 A17 B16 )
14 91.7 A5-B19 A14-B28 A19-B33 ( A5 B19 A14 B28 A19 B33 )
20 74.1 A5-B18 A16-B29 ( A5 B18 A16 B29 )
21 71.2 A31-B9 A38-B16 ( A31 B9 A38 B16 )
29 61.5 A21-B1 A39-B19 ( A21 B1 A39 B19 )
31 59.1 A15-B3 A25-B13 ( A15 B3 A25 B13 )
35 54.8 A3-B16 A16-B29 ( A3 B16 A16 B29 )
40 43.1 A39-B18 ( A39 B18 )
52 34.5 A5-B17 ( A5 B17 )
58 32.8 A25-B12 ( A25 B12 )
79 27.4 A39-B16 ( A39 B16 )
83 27.3 A39-B17 ( A39 B17 )