A=Drosophilapseudoobscura.Q28WW7, B=Ustilagomaydis.Q8NJ74, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
167.8
A18-B7
A23-B12
A40-B29
A111-B100
(
A18
B7
A23
B12
A40
B29
A111
B100
)
2
153.1
A18-B39
A49-B70
A68-B89
A78-B99
(
A18
B39
A49
B70
A68
B89
A78
B99
)
3
151.4
A1-B62
A9-B70
A22-B83
A41-B102
(
A1
B62
A9
B70
A22
B83
A41
B102
)
4
124.5
A22-B11
A40-B29
A111-B100
(
A22
B11
A40
B29
A111
B100
)
5
119.4
A7-B37
A22-B52
A73-B103
(
A7
B37
A22
B52
A73
B103
)
7
116.6
A57-B29
A67-B39
A94-B66
(
A57
B29
A67
B39
A94
B66
)
8
116.2
A35-B67
A55-B87
A67-B99
(
A35
B67
A55
B87
A67
B99
)
10
115.4
A18-B11
A77-B70
A91-B84
(
A18
B11
A77
B70
A91
B84
)
11
114.9
A86-B9
A102-B25
A109-B32
(
A86
B9
A102
B25
A109
B32
)
12
113.6
A16-B25
A79-B88
A86-B95
(
A16
B25
A79
B88
A86
B95
)
13
113.4
A11-B22
A20-B31
A32-B43
(
A11
B22
A20
B31
A32
B43
)
14
113.3
A53-B30
A92-B69
A105-B82
(
A53
B30
A92
B69
A105
B82
)
15
111.9
A45-B18
A57-B30
A90-B63
(
A45
B18
A57
B30
A90
B63
)
16
110.3
A59-B31
A67-B39
A94-B66
(
A59
B31
A67
B39
A94
B66
)
17
109.4
A20-B3
A43-B26
A48-B31
(
A20
B3
A43
B26
A48
B31
)
18
93.5
A41-B30
A111-B100
(
A41
B30
A111
B100
)
19
83.8
A57-B89
A67-B99
(
A57
B89
A67
B99
)
20
82.2
A68-B29
A96-B57
(
A68
B29
A96
B57
)
22
81.7
A7-B25
A52-B70
(
A7
B25
A52
B70
)
24
80.8
A26-B69
A44-B87
(
A26
B69
A44
B87
)
25
79.4
A29-B10
A112-B93
(
A29
B10
A112
B93
)
26
79.3
A109-B17
A116-B24
(
A109
B17
A116
B24
)
27
78.8
A41-B68
A75-B102
(
A41
B68
A75
B102
)
28
78.8
A70-B31
A96-B57
(
A70
B31
A96
B57
)
30
78.4
A18-B32
A82-B96
(
A18
B32
A82
B96
)
31
78.4
A37-B74
A59-B96
(
A37
B74
A59
B96
)
32
77.9
A79-B89
A89-B99
(
A79
B89
A89
B99
)
36
76.1
A68-B88
A75-B95
(
A68
B88
A75
B95
)
37
76.1
A75-B9
A96-B30
(
A75
B9
A96
B30
)
40
74.6
A33-B39
A55-B61
(
A33
B39
A55
B61
)
41
74.3
A35-B19
A46-B30
(
A35
B19
A46
B30
)
42
73.4
A5-B68
A32-B95
(
A5
B68
A32
B95
)
45
72.8
A57-B9
A65-B17
(
A57
B9
A65
B17
)
46
72.8
A95-B32
A115-B52
(
A95
B32
A115
B52
)
47
72.6
A55-B70
A81-B96
(
A55
B70
A81
B96
)
48
72.2
A33-B37
A65-B69
(
A33
B37
A65
B69
)
49
72.2
A53-B24
A93-B64
(
A53
B24
A93
B64
)
50
72.2
A99-B52
A113-B66
(
A99
B52
A113
B66
)
51
70.8
A3-B52
A53-B102
(
A3
B52
A53
B102
)
52
70.8
A97-B15
A114-B32
(
A97
B15
A114
B32
)
53
56.7
A91-B30
(
A91
B30
)
54
53.1
A47-B30
(
A47
B30
)
55
50
A53-B71
(
A53
B71
)
56
46.9
A119-B17
(
A119
B17
)
57
46.7
A79-B29
(
A79
B29
)
58
46.7
A109-B85
(
A109
B85
)
59
46.7
A115-B16
(
A115
B16
)
60
45.5
A53-B31
(
A53
B31
)
61
45.5
A64-B31
(
A64
B31
)
62
45.2
A22-B8
(
A22
B8
)
63
44.1
A97-B30
(
A97
B30
)
64
43.3
A81-B31
(
A81
B31
)
65
43.3
A107-B83
(
A107
B83
)
66
43.3
A111-B39
(
A111
B39
)
68
42.9
A75-B30
(
A75
B30
)
69
42.9
A86-B30
(
A86
B30
)
70
42.4
A51-B29
(
A51
B29
)
71
42.4
A62-B29
(
A62
B29
)
72
42.4
A113-B94
(
A113
B94
)
73
41.9
A24-B82
(
A24
B82
)
74
41.9
A31-B38
(
A31
B38
)
75
41.9
A39-B52
(
A39
B52
)
76
41.9
A93-B86
(
A93
B86
)
77
41.2
A95-B67
(
A95
B67
)
78
40.6
A16-B38
(
A16
B38
)
79
40.6
A41-B70
(
A41
B70
)
80
40.6
A97-B1
(
A97
B1
)
81
40
A24-B6
(
A24
B6
)
82
40
A29-B53
(
A29
B53
)
83
40
A31-B6
(
A31
B6
)
84
40
A37-B103
(
A37
B103
)
85
40
A75-B31
(
A75
B31
)
87
40
A86-B31
(
A86
B31
)
89
40
A113-B15
(
A113
B15
)
90
39.4
A9-B83
(
A9
B83
)
91
39.4
A16-B91
(
A16
B91
)
92
39.4
A115-B68
(
A115
B68
)
93
38.9
A9-B104
(
A9
B104
)
94
38.9
A109-B33
(
A109
B33
)
95
38.7
A1-B84
(
A1
B84
)
96
38.7
A37-B70
(
A37
B70
)
98
38.7
A95-B97
(
A95
B97
)
99
38.7
A97-B9
(
A97
B9
)
100
38.7
A97-B85
(
A97
B85
)
102
38.2
A9-B105
(
A9
B105
)
104
38.2
A113-B53
(
A113
B53
)
105
37.8
A64-B30
(
A64
B30
)
106
37.5
A5-B85
(
A5
B85
)
107
37.5
A7-B53
(
A7
B53
)
108
37.5
A22-B64
(
A22
B64
)
109
37.5
A45-B88
(
A45
B88
)
110
36.7
A11-B19
(
A11
B19
)
111
36.7
A24-B10
(
A24
B10
)
112
36.7
A66-B70
(
A66
B70
)
114
36.7
A84-B103
(
A84
B103
)
117
36.7
A97-B69
(
A97
B69
)
119
36.4
A16-B39
(
A16
B39
)
120
36.4
A18-B68
(
A18
B68
)
121
36.4
A37-B81
(
A37
B81
)
123
36.1
A97-B31
(
A97
B31
)
124
35.5
A14-B66
(
A14
B66
)
125
35.5
A22-B4
(
A22
B4
)
126
35.5
A22-B20
(
A22
B20
)
127
35.5
A41-B10
(
A41
B10
)
129
35.5
A57-B51
(
A57
B51
)
130
35.5
A66-B61
(
A66
B61
)
132
35.5
A86-B102
(
A86
B102
)
133
35.5
A89-B3
(
A89
B3
)
134
35.5
A97-B94
(
A97
B94
)
135
35.5
A99-B18
(
A99
B18
)
138
35.3
A68-B9
(
A68
B9
)
139
35.3
A79-B9
(
A79
B9
)
140
35.3
A109-B34
(
A109
B34
)
141
35.3
A111-B79
(
A111
B79
)
143
35.1
A70-B96
(
A70
B96
)