A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =35, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
50.9
A40-B3
(
A40
B3
)
2
49.1
A97-B5
(
A97
B5
)
3
46.4
A97-B4
(
A97
B4
)
4
43.6
A114-B3
(
A114
B3
)
5
42.4
A55-B32
(
A55
B32
)
6
42.4
A63-B3
(
A63
B3
)
7
42.1
A78-B2
A102-B26
(
A78
B2
A102
B26
)
8
42.1
A91-B13
(
A91
B13
)
9
41.9
A40-B2
(
A40
B2
)
10
41.8
A72-B14
(
A72
B14
)
11
41.8
A83-B14
(
A83
B14
)
12
41.5
A21-B1
(
A21
B1
)
13
41.4
A40-B12
(
A40
B12
)
14
41.1
A50-B2
(
A50
B2
)
15
41.1
A61-B2
(
A61
B2
)
16
41.0
A95-B3
(
A95
B3
)
17
40.7
A74-B16
(
A74
B16
)
18
40.7
A85-B16
(
A85
B16
)
19
40.5
A74-B3
A103-B32
(
A74
B3
A103
B32
)
20
40.5
A88-B1
A98-B11
(
A88
B1
A98
B11
)
21
40.4
A50-B15
(
A50
B15
)
22
40.1
A72-B1
A103-B32
(
A72
B1
A103
B32
)
23
40.0
A74-B17
(
A74
B17
)
24
40.0
A85-B17
(
A85
B17
)
25
39.7
A38-B35
(
A38
B35
)
26
39.7
A52-B3
(
A52
B3
)
27
39.7
A97-B17
(
A97
B17
)
28
39.6
A40-B4
A52-B16
(
A40
B4
A52
B16
)
29
39.5
A57-B4
A68-B15
(
A57
B4
A68
B15
)
30
39.3
A25-B12
(
A25
B12
)
31
39.3
A55-B26
(
A55
B26
)
32
39.3
A74-B4
(
A74
B4
)
33
39.0
A102-B26
(
A102
B26
)
34
38.9
A35-B35
(
A35
B35
)
35
38.8
A46-B4
A57-B15
(
A46
B4
A57
B15
)
36
38.8
A68-B4
A79-B15
(
A68
B4
A79
B15
)
37
38.8
A68-B3
A93-B28
(
A68
B3
A93
B28
)
38
38.7
A46-B3
(
A46
B3
)
39
38.7
A57-B3
(
A57
B3
)
40
38.6
A68-B15
(
A68
B15
)
41
38.6
A85-B3
(
A85
B3
)
42
38.5
A110-B13
(
A110
B13
)
43
38.3
A63-B4
(
A63
B4
)
44
38.2
A27-B33
(
A27
B33
)
45
38.1
A93-B19
(
A93
B19
)
46
38.0
A106-B4
A111-B9
(
A106
B4
A111
B9
)
47
37.9
A7-B35
(
A7
B35
)
48
37.9
A38-B1
(
A38
B1
)
49
37.9
A50-B1
(
A50
B1
)
50
37.9
A61-B1
(
A61
B1
)
51
37.9
A76-B25
(
A76
B25
)
52
37.9
A83-B1
(
A83
B1
)
53
37.9
A80-B4
A102-B26
(
A80
B4
A102
B26
)
54
37.7
A16-B13
A38-B35
(
A16
B13
A38
B35
)
55
37.5
A42-B32
(
A42
B32
)
56
37.5
A52-B16
(
A52
B16
)
57
37.3
A66-B1
A93-B28
(
A66
B1
A93
B28
)
58
37.3
A70-B5
A93-B28
(
A70
B5
A93
B28
)
59
37.3
A78-B3
A94-B19
A103-B28
(
A78
B3
A94
B19
A103
B28
)
60
37.3
A21-B20
A29-B28
(
A21
B20
A29
B28
)
61
37.3
A23-B23
A35-B35
(
A23
B23
A35
B35
)
62
37.3
A29-B28
(
A29
B28
)
63
37.3
A46-B15
(
A46
B15
)
64
37.3
A52-B4
(
A52
B4
)
65
37.3
A57-B15
(
A57
B15
)
66
37.2
A85-B4
A108-B27
(
A85
B4
A108
B27
)
67
37.0
A27-B14
(
A27
B14
)
68
37.0
A40-B11
A53-B24
(
A40
B11
A53
B24
)
69
36.8
A44-B1
(
A44
B1
)
70
36.8
A93-B28
(
A93
B28
)
71
36.7
A13-B11
A30-B28
(
A13
B11
A30
B28
)
72
36.7
A106-B9
(
A106
B9
)
73
36.5
A9-B14
A24-B29
(
A9
B14
A24
B29
)
74
36.4
A112-B2
(
A112
B2
)
75
36.2
A11-B26
(
A11
B26
)
76
36.2
A72-B2
(
A72
B2
)
77
36.2
A118-B23
(
A118
B23
)
78
36.1
A91-B17
(
A91
B17
)
79
35.8
A9-B25
(
A9
B25
)
80
35.8
A16-B12
(
A16
B12
)
81
35.7
A31-B10
(
A31
B10
)
82
35.7
A38-B14
(
A38
B14
)
83
35.7
A83-B2
A108-B27
(
A83
B2
A108
B27
)
84
35.6
A23-B5
A30-B12
A39-B21
(
A23
B5
A30
B12
A39
B21
)
85
35.6
A29-B18
(
A29
B18
)
86
35.5
A74-B13
(
A74
B13
)
87
35.5
A85-B13
(
A85
B13
)
88
35.4
A42-B5
(
A42
B5
)
89
35.4
A95-B4
(
A95
B4
)
90
35.2
A108-B27
(
A108
B27
)