A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
2 50.0 A5-B18 ( A5 B18 )
5 48.2 A3-B3 A8-B8 A13-B13 A18-B18 A30-B30 ( A3 B3 A8 B8 A13 B13 A18 B18 A30 B30 )
6 47.8 A5-B5 A10-B10 A15-B15 A30-B30 ( A5 B5 A10 B10 A15 B15 A30 B30 )
8 47.2 A7-B7 A12-B12 A17-B17 A30-B30 ( A7 B7 A12 B12 A17 B17 A30 B30 )
15 45.4 A9-B9 A14-B14 A30-B30 ( A9 B9 A14 B14 A30 B30 )
17 44.6 A25-B4 A41-B20 A50-B29 ( A25 B4 A41 B20 A50 B29 )
20 43.8 A7-B20 ( A7 B20 )
24 43.8 A44-B11 A50-B17 ( A44 B11 A50 B17 )
35 41.2 A5-B16 ( A5 B16 )
49 40.0 A38-B13 A54-B29 ( A38 B13 A54 B29 )
50 39.7 A15-B4 A23-B12 A35-B24 ( A15 B4 A23 B12 A35 B24 )
64 38.5 A9-B13 A14-B18 ( A9 B13 A14 B18 )
66 38.4 A1-B8 A10-B17 A25-B32 ( A1 B8 A10 B17 A25 B32 )
79 37.1 A36-B8 ( A36 B8 )
82 37.0 A3-B7 A8-B12 A14-B18 ( A3 B7 A8 B12 A14 B18 )
83 36.8 A23-B12 A35-B24 ( A23 B12 A35 B24 )
88 36.4 A27-B14 ( A27 B14 )
96 36.0 A31-B7 A40-B16 A47-B23 ( A31 B7 A40 B16 A47 B23 )
99 35.8 A40-B16 A47-B23 ( A40 B16 A47 B23 )