A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =25, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
85.7
A98-B11
A106-B19
A114-B27
(
A98
B11
A106
B19
A114
B27
)
2
84
A98-B3
A107-B12
A115-B20
(
A98
B3
A107
B12
A115
B20
)
3
77.4
A72-B3
A90-B21
A98-B29
(
A72
B3
A90
B21
A98
B29
)
4
71.6
A78-B2
A94-B18
(
A78
B2
A94
B18
)
5
66.9
A62-B3
A74-B15
(
A62
B3
A74
B15
)
6
64.8
A108-B5
A120-B17
(
A108
B5
A120
B17
)
7
62
A72-B2
A85-B15
(
A72
B2
A85
B15
)
8
61.2
A13-B11
A20-B18
(
A13
B11
A20
B18
)
9
58.8
A98-B4
A114-B20
(
A98
B4
A114
B20
)
10
58.6
A16-B12
A39-B35
(
A16
B12
A39
B35
)
11
57.9
A60-B1
A74-B15
(
A60
B1
A74
B15
)
12
57.3
A74-B4
A85-B15
(
A74
B4
A85
B15
)
14
56.7
A90-B4
A113-B27
(
A90
B4
A113
B27
)
15
55.4
A13-B3
A45-B35
(
A13
B3
A45
B35
)
16
55.4
A4-B3
A19-B18
(
A4
B3
A19
B18
)
17
51.9
A83-B3
A92-B12
(
A83
B3
A92
B12
)
19
45.5
A96-B4
(
A96
B4
)
20
44.6
A96-B3
(
A96
B3
)
21
41.4
A62-B2
(
A62
B2
)
22
41.1
A39-B2
(
A39
B2
)
23
40.4
A67-B2
(
A67
B2
)
24
39.7
A51-B2
(
A51
B2
)
25
38.5
A110-B13
(
A110
B13
)
26
38
A25-B12
(
A25
B12
)
27
37.5
A51-B3
(
A51
B3
)
28
37.5
A98-B5
(
A98
B5
)
29
37
A27-B14
(
A27
B14
)
30
36.4
A112-B2
(
A112
B2
)
31
36.4
A114-B3
(
A114
B3
)
32
36.2
A83-B2
(
A83
B2
)
33
36.1
A41-B3
(
A41
B3
)
34
36
A98-B15
(
A98
B15
)
35
35.2
A39-B10
(
A39
B10
)
36
35
A2-B12
(
A2
B12
)
37
34.6
A114-B10
(
A114
B10
)
38
34.5
A72-B15
(
A72
B15
)
39
34.5
A83-B15
(
A83
B15
)
40
34.5
A94-B2
(
A94
B2
)
41
33.8
A96-B5
(
A96
B5
)
42
33.3
A27-B34
(
A27
B34
)
43
32.8
A23-B6
(
A23
B6
)
44
32.8
A27-B35
(
A27
B35
)
45
32.8
A45-B2
(
A45
B2
)
46
32.8
A56-B2
(
A56
B2
)
48
32.1
A49-B1
(
A49
B1
)
49
31.8
A39-B3
(
A39
B3
)
50
31.6
A23-B7
(
A23
B7
)
51
31.5
A85-B4
(
A85
B4
)
53
31.5
A118-B22
(
A118
B22
)
54
31.4
A108-B6
(
A108
B6
)
56
30.9
A41-B12
(
A41
B12
)
57
30.8
A2-B13
(
A2
B13
)
58
30.6
A62-B4
(
A62
B4
)
59
30.4
A16-B13
(
A16
B13
)
60
30.4
A74-B3
(
A74
B3
)
61
30.4
A85-B3
(
A85
B3
)
62
30.2
A76-B14
(
A76
B14
)
63
29.8
A20-B1
(
A20
B1
)
64
29.4
A106-B9
(
A106
B9
)
65
29.3
A18-B30
(
A18
B30
)
66
29.3
A34-B3
(
A34
B3
)
67
28.6
A37-B13
(
A37
B13
)
68
28.6
A112-B10
(
A112
B10
)
70
28.6
A118-B23
(
A118
B23
)
71
28.1
A18-B10
(
A18
B10
)
72
28.1
A74-B11
(
A74
B11
)
73
28.1
A85-B11
(
A85
B11
)
75
27.9
A67-B3
(
A67
B3
)
76
27.9
A78-B3
(
A78
B3
)
77
27.4
A51-B4
(
A51
B4
)
78
27.3
A110-B5
(
A110
B5
)
79
27.3
A110-B6
(
A110
B6
)
80
27.3
A112-B7
(
A112
B7
)
81
27
A45-B1
(
A45
B1
)
82
27
A56-B1
(
A56
B1
)
85
26.6
A56-B35
(
A56
B35
)
86
26.5
A62-B1
(
A62
B1
)
87
26.2
A108-B11
(
A108
B11
)
88
25.9
A88-B10
(
A88
B10
)
89
25.8
A49-B2
(
A49
B2
)
90
25.8
A60-B2
(
A60
B2
)
93
25.4
A9-B34
(
A9
B34
)
94
25.4
A25-B8
(
A25
B8
)
96
25.4
A96-B17
(
A96
B17
)