A=Drosophilamelanogaster.Q9W157, B=Drosophilapseudoobscura.Q28WW7, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 307.1 A12-B40 A36-B64 A58-B86 A63-B91 A68-B96 A86-B114 A91-B119 ( A12 B40 A36 B64 A58 B86 A63 B91 A68 B96 A86 B114 A91 B119 )
2 283.8 A41-B35 A47-B41 A53-B47 A58-B52 A63-B57 A68-B62 A75-B69 ( A41 B35 A47 B41 A53 B47 A58 B52 A63 B57 A68 B62 A75 B69 )
3 275.3 A22-B27 A33-B38 A47-B52 A53-B58 A58-B63 A75-B80 ( A22 B27 A33 B38 A47 B52 A53 B58 A58 B63 A75 B80 )
5 234.7 A8-B10 A13-B15 A18-B20 A32-B34 A39-B41 A50-B52 ( A8 B10 A13 B15 A18 B20 A32 B34 A39 B41 A50 B52 )
6 227.6 A35-B40 A47-B52 A53-B58 A58-B63 A75-B80 ( A35 B40 A47 B52 A53 B58 A58 B63 A75 B80 )
7 226.8 A47-B74 A53-B80 A58-B85 A86-B113 A92-B119 ( A47 B74 A53 B80 A58 B85 A86 B113 A92 B119 )
8 223.7 A10-B12 A15-B17 A32-B34 A39-B41 A50-B52 ( A10 B12 A15 B17 A32 B34 A39 B41 A50 B52 )
10 211.6 A37-B42 A47-B52 A53-B58 A58-B63 A75-B80 ( A37 B42 A47 B52 A53 B58 A58 B63 A75 B80 )
11 210.8 A12-B14 A18-B20 A32-B34 A39-B41 A50-B52 ( A12 B14 A18 B20 A32 B34 A39 B41 A50 B52 )
12 210.5 A18-B17 A47-B46 A52-B51 A57-B56 A75-B74 ( A18 B17 A47 B46 A52 B51 A57 B56 A75 B74 )
14 196.2 A22-B26 A44-B48 A53-B57 A65-B69 A74-B78 ( A22 B26 A44 B48 A53 B57 A65 B69 A74 B78 )
17 180.9 A47-B69 A56-B78 A63-B85 A68-B90 ( A47 B69 A56 B78 A63 B85 A68 B90 )
18 179.7 A25-B32 A30-B37 A54-B61 A67-B74 A78-B85 ( A25 B32 A30 B37 A54 B61 A67 B74 A78 B85 )
19 177.9 A47-B57 A52-B62 A58-B68 A75-B85 ( A47 B57 A52 B62 A58 B68 A75 B85 )
20 176.4 A31-B69 A47-B85 A53-B91 A58-B96 ( A31 B69 A47 B85 A53 B91 A58 B96 )
21 176.1 A6-B7 A11-B12 A67-B68 A76-B77 ( A6 B7 A11 B12 A67 B68 A76 B77 )
23 173.2 A47-B58 A56-B67 A63-B74 A68-B79 ( A47 B58 A56 B67 A63 B74 A68 B79 )
24 172.5 A47-B79 A52-B84 A58-B90 A87-B119 ( A47 B79 A52 B84 A58 B90 A87 B119 )
25 172.5 A47-B47 A57-B57 A62-B62 A68-B68 ( A47 B47 A57 B57 A62 B62 A68 B68 )
26 172.3 A4-B5 A10-B11 A67-B68 A76-B77 ( A4 B5 A10 B11 A67 B68 A76 B77 )
28 170 A47-B68 A52-B73 A58-B79 A74-B95 ( A47 B68 A52 B73 A58 B79 A74 B95 )
29 169.6 A25-B48 A31-B54 A63-B86 A68-B91 ( A25 B48 A31 B54 A63 B86 A68 B91 )
30 165.4 A47-B63 A53-B69 A58-B74 A75-B91 ( A47 B63 A53 B69 A58 B74 A75 B91 )
31 164.3 A47-B26 A64-B43 A69-B48 A78-B57 ( A47 B26 A64 B43 A69 B48 A78 B57 )
32 158.6 A45-B71 A53-B79 A65-B91 A81-B107 ( A45 B71 A53 B79 A65 B91 A81 B107 )
33 158.3 A14-B16 A32-B34 A39-B41 A50-B52 ( A14 B16 A32 B34 A39 B41 A50 B52 )
34 157.1 A45-B60 A53-B68 A65-B80 A75-B90 ( A45 B60 A53 B68 A65 B80 A75 B90 )
35 156.3 A4-B1 A28-B25 A38-B35 A89-B86 ( A4 B1 A28 B25 A38 B35 A89 B86 )
37 151.8 A45-B49 A53-B57 A65-B69 A74-B78 ( A45 B49 A53 B57 A65 B69 A74 B78 )
38 151.3 A57-B79 A63-B85 A68-B90 ( A57 B79 A63 B85 A68 B90 )
39 151 A57-B51 A63-B57 A68-B62 A75-B69 ( A57 B51 A63 B57 A68 B62 A75 B69 )
40 149.4 A20-B54 A25-B59 A31-B65 A63-B97 ( A20 B54 A25 B59 A31 B65 A63 B97 )
41 148.5 A57-B68 A63-B74 A68-B79 ( A57 B68 A63 B74 A68 B79 )
42 146.5 A63-B80 A68-B85 A83-B100 ( A63 B80 A68 B85 A83 B100 )
43 145.9 A63-B69 A68-B74 A79-B85 ( A63 B69 A68 B74 A79 B85 )
44 145.9 A29-B16 A38-B25 A45-B32 A74-B61 ( A29 B16 A38 B25 A45 B32 A74 B61 )
45 142.6 A59-B48 A64-B53 A69-B58 ( A59 B48 A64 B53 A69 B58 )
46 142.4 A63-B47 A68-B52 A79-B63 ( A63 B47 A68 B52 A79 B63 )
47 141.2 A59-B70 A64-B75 A69-B80 ( A59 B70 A64 B75 A69 B80 )
49 138.4 A59-B81 A64-B86 A69-B91 ( A59 B81 A64 B86 A69 B91 )
50 136.1 A59-B59 A64-B64 A69-B69 ( A59 B59 A64 B64 A69 B69 )
52 135.4 A59-B86 A86-B113 A92-B119 ( A59 B86 A86 B113 A92 B119 )
53 135.3 A69-B97 A86-B114 A91-B119 ( A69 B97 A86 B114 A91 B119 )
54 135 A63-B75 A68-B80 A76-B88 ( A63 B75 A68 B80 A76 B88 )
56 133.8 A63-B58 A68-B63 A79-B74 ( A63 B58 A68 B63 A79 B74 )
58 133.3 A53-B52 A58-B57 A75-B74 ( A53 B52 A58 B57 A75 B74 )
59 132.2 A67-B95 A86-B114 A91-B119 ( A67 B95 A86 B114 A91 B119 )
60 131.9 A8-B9 A67-B68 A76-B77 ( A8 B9 A67 B68 A76 B77 )
61 131.8 A53-B85 A58-B90 A87-B119 ( A53 B85 A58 B90 A87 B119 )
62 129.6 A47-B80 A57-B90 A63-B96 ( A47 B80 A57 B90 A63 B96 )
63 129.3 A53-B74 A58-B79 A74-B95 ( A53 B74 A58 B79 A74 B95 )
66 126.1 A31-B80 A47-B96 A58-B107 ( A31 B80 A47 B96 A58 B107 )
67 126 A57-B84 A86-B113 A92-B119 ( A57 B84 A86 B113 A92 B119 )
68 124.8 A53-B63 A58-B68 A75-B85 ( A53 B63 A58 B68 A75 B85 )
69 124.5 A12-B13 A67-B68 A76-B77 ( A12 B13 A67 B68 A76 B77 )
70 123.7 A29-B26 A38-B35 A89-B86 ( A29 B26 A38 B35 A89 B86 )
72 121.8 A59-B53 A68-B62 A75-B69 ( A59 B53 A68 B62 A75 B69 )
74 121.6 A18-B9 A36-B27 A73-B64 ( A18 B9 A36 B27 A73 B64 )
75 121 A57-B46 A62-B51 A67-B56 ( A57 B46 A62 B51 A67 B56 )
76 118.6 A53-B46 A65-B58 A74-B67 ( A53 B46 A65 B58 A74 B67 )
77 117.5 A35-B25 A67-B57 A77-B67 ( A35 B25 A67 B57 A77 B67 )
78 116.8 A57-B40 A63-B46 A68-B51 ( A57 B40 A63 B46 A68 B51 )
79 116.7 A73-B23 A81-B31 A91-B41 ( A73 B23 A81 B31 A91 B41 )
81 115.5 A63-B52 A68-B57 ( A63 B52 A68 B57 )
82 114.2 A33-B35 A39-B41 A50-B52 ( A33 B35 A39 B41 A50 B52 )
84 113.8 A77-B97 A84-B104 A89-B109 ( A77 B97 A84 B104 A89 B109 )
85 112.2 A6-B66 A31-B91 A52-B112 ( A6 B66 A31 B91 A52 B112 )
86 111.9 A63-B41 A68-B46 ( A63 B41 A68 B46 )
87 111.5 A87-B115 A92-B120 ( A87 B115 A92 B120 )
88 110.1 A20-B76 A30-B86 A42-B98 ( A20 B76 A30 B86 A42 B98 )
89 109.6 A18-B21 A31-B34 ( A18 B21 A31 B34 )
91 108.5 A37-B25 A57-B45 A75-B63 ( A37 B25 A57 B45 A75 B63 )
92 108.4 A39-B26 A45-B32 A74-B61 ( A39 B26 A45 B32 A74 B61 )
93 106.7 A63-B63 A68-B68 ( A63 B63 A68 B68 )
94 106 A89-B116 A94-B121 ( A89 B116 A94 B121 )
95 103.2 A87-B114 A92-B119 ( A87 B114 A92 B119 )
99 95.4 A16-B19 A31-B34 ( A16 B19 A31 B34 )
101 91.5 A69-B86 A83-B100 ( A69 B86 A83 B100 )
102 91.2 A75-B46 A93-B64 ( A75 B46 A93 B64 )
103 90.9 A14-B17 A31-B34 ( A14 B17 A31 B34 )
104 90.9 A69-B75 A79-B85 ( A69 B75 A79 B85 )
105 90 A29-B65 A63-B99 ( A29 B65 A63 B99 )
106 89.8 A59-B58 A75-B74 ( A59 B58 A75 B74 )
107 89.8 A67-B51 A79-B63 ( A67 B51 A79 B63 )
108 89.6 A47-B90 A52-B95 ( A47 B90 A52 B95 )
111 87.7 A67-B62 A79-B74 ( A67 B62 A79 B74 )
112 87.3 A59-B69 A75-B85 ( A59 B69 A75 B85 )
113 86.6 A69-B53 A79-B63 ( A69 B53 A79 B63 )
114 85.9 A59-B64 A75-B80 ( A59 B64 A75 B80 )
115 85.5 A39-B36 A89-B86 ( A39 B36 A89 B86 )
116 85.2 A31-B39 A91-B99 ( A31 B39 A91 B99 )
117 85.1 A67-B84 A83-B100 ( A67 B84 A83 B100 )
118 84.5 A67-B73 A79-B85 ( A67 B73 A79 B85 )
120 83.5 A67-B79 A76-B88 ( A67 B79 A76 B88 )
121 83.5 A69-B70 A76-B77 ( A69 B70 A76 B77 )
122 83.5 A69-B81 A76-B88 ( A69 B81 A76 B88 )
124 82.8 A59-B42 A68-B51 ( A59 B42 A68 B51 )
125 82.8 A59-B75 A75-B91 ( A59 B75 A75 B91 )
126 82.6 A59-B80 A74-B95 ( A59 B80 A74 B95 )
127 82 A85-B99 A95-B109 ( A85 B99 A95 B109 )
128 81.8 A59-B47 A75-B63 ( A59 B47 A75 B63 )
130 81.3 A69-B64 A79-B74 ( A69 B64 A79 B74 )
132 81.1 A59-B36 A75-B52 ( A59 B36 A75 B52 )
134 81.1 A69-B59 A77-B67 ( A69 B59 A77 B67 )
135 80.6 A69-B42 A79-B52 ( A69 B42 A79 B52 )
136 80.4 A67-B46 A78-B57 ( A67 B46 A78 B57 )
138 80.1 A63-B37 A79-B53 ( A63 B37 A79 B53 )
139 79.7 A59-B91 A87-B119 ( A59 B91 A87 B119 )
140 78.8 A59-B92 A64-B97 ( A59 B92 A64 B97 )
141 78.7 A49-B92 A54-B97 ( A49 B92 A54 B97 )
143 78.4 A89-B117 A94-B122 ( A89 B117 A94 B122 )
144 78 A57-B62 A75-B80 ( A57 B62 A75 B80 )
145 77.4 A35-B2 A53-B20 ( A35 B2 A53 B20 )
147 76.7 A79-B23 A85-B29 ( A79 B23 A85 B29 )
149 76.2 A31-B87 A42-B98 ( A31 B87 A42 B98 )
150 76.2 A33-B89 A42-B98 ( A33 B89 A42 B98 )
153 75.5 A45-B82 A53-B90 ( A45 B82 A53 B90 )
154 75.5 A73-B16 A83-B26 ( A73 B16 A83 B26 )
155 75.4 A8-B32 A39-B63 ( A8 B32 A39 B63 )
156 75.1 A77-B48 A93-B64 ( A77 B48 A93 B64 )
157 74.6 A43-B23 A51-B31 ( A43 B23 A51 B31 )
158 74.2 A2-B42 A21-B61 ( A2 B42 A21 B61 )
159 74.2 A65-B47 A74-B56 ( A65 B47 A74 B56 )
161 73.7 A6-B87 A33-B114 ( A6 B87 A33 B114 )
162 73.7 A8-B89 A33-B114 ( A8 B89 A33 B114 )
163 73.4 A57-B73 A75-B91 ( A57 B73 A75 B91 )
164 73.3 A33-B67 A63-B97 ( A33 B67 A63 B97 )
167 73 A87-B29 A92-B34 ( A87 B29 A92 B34 )
169 72.8 A61-B39 A67-B45 ( A61 B39 A67 B45 )
170 71.8 A69-B63 A75-B69 ( A69 B63 A75 B69 )
172 71.2 A67-B85 A81-B99 ( A67 B85 A81 B99 )
173 65.6 A95-B122 ( A95 B122 )
174 58.8 A69-B92 ( A69 B92 )
175 58.1 A33-B36 ( A33 B36 )
176 57.6 A59-B97 ( A59 B97 )
177 55.9 A69-B47 ( A69 B47 )
180 54.8 A75-B57 ( A75 B57 )
183 51.6 A75-B68 ( A75 B68 )
184 51.6 A75-B79 ( A75 B79 )
185 50 A67-B90 ( A67 B90 )
188 45.5 A75-B96 ( A75 B96 )
189 45.2 A53-B96 ( A53 B96 )
192 44.4 A93-B120 ( A93 B120 )
195 44.1 A79-B75 ( A79 B75 )
196 44.1 A79-B86 ( A79 B86 )
197 44.1 A93-B121 ( A93 B121 )
198 43.8 A51-B64 ( A51 B64 )
200 43.3 A85-B19 ( A85 B19 )
203 42.4 A57-B95 ( A57 B95 )
205 42.4 A77-B98 ( A77 B98 )
206 42.4 A79-B38 ( A79 B38 )
207 41.9 A73-B25 ( A73 B25 )
208 41.9 A77-B70 ( A77 B70 )
209 41.9 A77-B81 ( A77 B81 )
210 41.9 A79-B47 ( A79 B47 )
211 41.9 A79-B58 ( A79 B58 )
212 41.9 A79-B69 ( A79 B69 )
213 41.9 A79-B80 ( A79 B80 )
215 41.7 A47-B91 ( A47 B91 )
218 40.6 A55-B30 ( A55 B30 )
219 40.6 A77-B42 ( A77 B42 )
220 40.6 A79-B41 ( A79 B41 )
221 40.5 A59-B98 ( A59 B98 )
223 40 A59-B117 ( A59 B117 )
226 39.5 A67-B96 ( A67 B96 )
228 39.4 A77-B78 ( A77 B78 )
229 39.4 A77-B89 ( A77 B89 )
231 38.7 A31-B76 ( A31 B76 )
232 38.7 A77-B59 ( A77 B59 )
233 38.7 A77-B92 ( A77 B92 )
234 38.7 A79-B91 ( A79 B91 )
235 38.7 A83-B43 ( A83 B43 )
236 38.7 A87-B43 ( A87 B43 )
238 38.5 A69-B52 ( A69 B52 )
239 38.2 A6-B76 ( A6 B76 )
241 38.2 A75-B51 ( A75 B51 )
242 38.2 A75-B62 ( A75 B62 )
244 37.8 A57-B96 ( A57 B96 )
246 37.5 A10-B98 ( A10 B98 )
247 37.5 A25-B100 ( A25 B100 )
248 37.5 A37-B100 ( A37 B100 )
249 37.5 A43-B99 ( A43 B99 )
250 37.1 A63-B109 ( A63 B109 )
251 36.7 A6-B63 ( A6 B63 )
253 36.7 A83-B23 ( A83 B23 )
256 36.7 A87-B21 ( A87 B21 )
257 36.4 A25-B103 ( A25 B103 )
258 36.4 A27-B99 ( A27 B99 )
259 36.4 A79-B2 ( A79 B2 )
267 35.5 A20-B87 ( A20 B87 )
268 35.5 A29-B111 ( A29 B111 )
269 35.5 A33-B78 ( A33 B78 )
272 35.5 A71-B101 ( A71 B101 )
273 35.5 A77-B8 ( A77 B8 )
274 35.5 A89-B75 ( A89 B75 )
276 35.3 A2-B113 ( A2 B113 )
277 35.3 A2-B119 ( A2 B119 )
280 35.3 A77-B53 ( A77 B53 )
281 35.3 A77-B64 ( A77 B64 )
283 35.3 A87-B107 ( A87 B107 )
285 35.3 A95-B32 ( A95 B32 )
286 35.1 A69-B41 ( A69 B41 )