A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =35, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 202.2 A1-B1 A6-B6 A11-B11 A16-B16 ( A1 B1 A6 B6 A11 B11 A16 B16 )
2 185.9 A3-B3 A8-B8 A13-B13 A18-B18 ( A3 B3 A8 B8 A13 B13 A18 B18 )
3 152.7 A5-B5 A10-B10 A15-B15 ( A5 B5 A10 B10 A15 B15 )
4 135.9 A7-B7 A12-B12 A17-B17 ( A7 B7 A12 B12 A17 B17 )
5 118.2 A1-B2 A11-B12 A16-B17 ( A1 B2 A11 B12 A16 B17 )
6 118.2 A3-B4 A11-B12 A16-B17 ( A3 B4 A11 B12 A16 B17 )
7 100.9 A9-B9 A14-B14 ( A9 B9 A14 B14 )
10 78.9 A3-B2 A16-B15 ( A3 B2 A16 B15 )
12 73.8 A5-B4 A16-B15 ( A5 B4 A16 B15 )
13 73.2 A7-B6 A16-B15 ( A7 B6 A16 B15 )
15 46.2 A5-B18 ( A5 B18 )
16 45.6 A15-B16 ( A15 B16 )
18 40.7 A5-B36 ( A5 B36 )
19 40.4 A13-B14 ( A13 B14 )
20 40.4 A38-B16 ( A38 B16 )
21 40.4 A55-B30 ( A55 B30 )
22 40 A35-B32 ( A35 B32 )
23 39.6 A15-B4 ( A15 B4 )
24 39.3 A15-B30 ( A15 B30 )
25 39.3 A53-B4 ( A53 B4 )
26 38.2 A53-B3 ( A53 B3 )
27 37.9 A50-B17 ( A50 B17 )
28 37.5 A5-B37 ( A5 B37 )
29 37.3 A42-B21 ( A42 B21 )
30 36.5 A53-B28 ( A53 B28 )
31 36.2 A15-B29 ( A15 B29 )
32 36 A38-B12 ( A38 B12 )
33 35.1 A17-B18 ( A17 B18 )