A=Ustilagomaydis.Q8NJ74, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 88 A30-B4 A38-B12 ( A30 B4 A38 B12 )
2 83.3 A50-B14 A66-B30 ( A50 B14 A66 B30 )
3 78.6 A16-B4 A36-B24 ( A16 B4 A36 B24 )
4 77.1 A64-B16 A83-B35 ( A64 B16 A83 B35 )
5 75.4 A61-B6 A68-B13 ( A61 B6 A68 B13 )
6 72.4 A54-B7 A84-B37 ( A54 B7 A84 B37 )
7 46.7 A38-B5 ( A38 B5 )
8 45.5 A5-B20 ( A5 B20 )
10 43.3 A54-B12 ( A54 B12 )
12 41.9 A97-B15 ( A97 B15 )
13 40 A5-B36 ( A5 B36 )
14 40 A50-B13 ( A50 B13 )
15 40 A59-B6 ( A59 B6 )
16 40 A77-B5 ( A77 B5 )
18 40 A86-B5 ( A86 B5 )
19 40 A99-B8 ( A99 B8 )
20 38.7 A18-B5 ( A18 B5 )
22 38.2 A30-B24 ( A30 B24 )
23 37.5 A8-B16 ( A8 B16 )
24 37.5 A48-B10 ( A48 B10 )
25 36.8 A23-B1 ( A23 B1 )
26 36.4 A8-B5 ( A8 B5 )
28 35.5 A2-B3 ( A2 B3 )
29 35.5 A16-B1 ( A16 B1 )
30 35.5 A21-B13 ( A21 B13 )
31 35.5 A36-B17 ( A36 B17 )
32 35.5 A45-B4 ( A45 B4 )
33 35.1 A48-B7 ( A48 B7 )