A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =35, length of fragment = 50, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 49.4 A5-B5 A10-B10 A15-B15 A37-B37 ( A5 B5 A10 B10 A15 B15 A37 B37 )
2 48.6 A1-B1 A6-B6 A11-B11 A16-B16 A37-B37 ( A1 B1 A6 B6 A11 B11 A16 B16 A37 B37 )
3 47.6 A3-B3 A8-B8 A13-B13 A18-B18 A37-B37 ( A3 B3 A8 B8 A13 B13 A18 B18 A37 B37 )
6 46.2 A5-B18 ( A5 B18 )
10 44.4 A7-B7 A12-B12 A17-B17 A37-B37 ( A7 B7 A12 B12 A17 B17 A37 B37 )
25 40.4 A38-B16 ( A38 B16 )
33 39.3 A7-B20 ( A7 B20 )
36 38.9 A1-B2 A7-B8 A12-B13 A17-B18 ( A1 B2 A7 B8 A12 B13 A17 B18 )
37 38.8 A28-B6 A38-B16 ( A28 B6 A38 B16 )
39 38.8 A7-B8 A12-B13 A17-B18 ( A7 B8 A12 B13 A17 B18 )
43 38.6 A38-B6 ( A38 B6 )
45 38.3 A5-B17 ( A5 B17 )
46 38.2 A21-B5 A38-B22 ( A21 B5 A38 B22 )
49 37.7 A3-B2 A8-B7 A16-B15 A23-B22 ( A3 B2 A8 B7 A16 B15 A23 B22 )
51 37.7 A5-B6 A12-B13 A17-B18 ( A5 B6 A12 B13 A17 B18 )
61 36.9 A40-B20 ( A40 B20 )
68 36.5 A38-B12 ( A38 B12 )
69 36.4 A23-B5 ( A23 B5 )
73 36.2 A7-B6 A16-B15 A23-B22 ( A7 B6 A16 B15 A23 B22 )
74 35.9 A21-B13 A47-B39 ( A21 B13 A47 B39 )