A=Drosophilapseudoobscura.Q28WW7, B=Ustilagomaydis.Q8NJ74, Threshold for similarity =30, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
122.9
A16-B5
A21-B10
A39-B28
(
A16
B5
A21
B10
A39
B28
)
2
110.2
A20-B3
A44-B27
A50-B33
(
A20
B3
A44
B27
A50
B33
)
3
102.8
A67-B28
A72-B33
A96-B57
(
A67
B28
A72
B33
A96
B57
)
4
99.4
A73-B7
A95-B29
A118-B52
(
A73
B7
A95
B29
A118
B52
)
5
97.8
A77-B17
A90-B30
A108-B48
(
A77
B17
A90
B30
A108
B48
)
6
97.7
A84-B7
A101-B24
A112-B35
(
A84
B7
A101
B24
A112
B35
)
7
97.6
A31-B26
A40-B35
A59-B54
(
A31
B26
A40
B35
A59
B54
)
8
96.2
A77-B2
A106-B31
A111-B36
(
A77
B2
A106
B31
A111
B36
)
9
78.5
A69-B30
A96-B57
(
A69
B30
A96
B57
)
10
77.7
A22-B11
A39-B28
(
A22
B11
A39
B28
)
11
76.4
A73-B28
A96-B51
(
A73
B28
A96
B51
)
12
76.1
A90-B29
A100-B39
(
A90
B29
A100
B39
)
13
75
A6-B17
A32-B43
(
A6
B17
A32
B43
)
14
71.7
A18-B39
A66-B87
(
A18
B39
A66
B87
)
15
71.6
A20-B62
A43-B85
(
A20
B62
A43
B85
)
16
71.2
A57-B29
A95-B67
(
A57
B29
A95
B67
)
17
70.9
A75-B30
A96-B51
(
A75
B30
A96
B51
)
18
70.1
A112-B44
A117-B49
(
A112
B44
A117
B49
)
19
69.8
A20-B41
A66-B87
(
A20
B41
A66
B87
)
20
69.6
A55-B28
A93-B66
(
A55
B28
A93
B66
)
21
69.3
A20-B63
A43-B86
(
A20
B63
A43
B86
)
22
68.7
A45-B28
A50-B33
(
A45
B28
A50
B33
)
23
68.5
A57-B30
A93-B66
(
A57
B30
A93
B66
)
24
68.2
A51-B28
A104-B81
(
A51
B28
A104
B81
)
25
68
A16-B37
A66-B87
(
A16
B37
A66
B87
)
26
67.2
A20-B10
A39-B29
(
A20
B10
A39
B29
)
28
66.8
A99-B79
A112-B92
(
A99
B79
A112
B92
)
29
66.6
A20-B74
A42-B96
(
A20
B74
A42
B96
)
30
66.6
A22-B4
A46-B28
(
A22
B4
A46
B28
)
32
65.3
A41-B29
A97-B85
(
A41
B29
A97
B85
)
35
63.6
A97-B31
A118-B52
(
A97
B31
A118
B52
)
36
63.5
A51-B7
A71-B27
(
A51
B7
A71
B27
)
37
63.1
A41-B36
A59-B54
(
A41
B36
A59
B54
)
38
61.9
A84-B30
A91-B37
(
A84
B30
A91
B37
)
39
61.3
A92-B9
A114-B31
(
A92
B9
A114
B31
)
40
45.3
A63-B30
(
A63
B30
)
41
43.4
A47-B30
(
A47
B30
)
42
43.4
A51-B29
(
A51
B29
)
44
42
A108-B84
(
A108
B84
)
45
41.5
A61-B28
(
A61
B28
)
46
41.2
A41-B30
(
A41
B30
)
47
40.4
A99-B15
(
A99
B15
)
48
40
A73-B29
(
A73
B29
)
49
40
A79-B29
(
A79
B29
)
50
40
A84-B28
(
A84
B28
)
51
40
A84-B29
(
A84
B29
)
52
40
A106-B82
(
A106
B82
)
53
39.2
A92-B85
(
A92
B85
)
54
38.9
A97-B30
(
A97
B30
)
55
38.6
A63-B29
(
A63
B29
)
56
38.5
A53-B85
(
A53
B85
)
59
37.7
A49-B27
(
A49
B27
)
60
37.5
A65-B85
(
A65
B85
)
61
37.3
A37-B74
(
A37
B74
)
62
37.3
A90-B83
(
A90
B83
)
63
36.5
A6-B79
(
A6
B79
)
64
36.5
A16-B38
(
A16
B38
)
65
36.5
A55-B87
(
A55
B87
)
66
36.5
A97-B1
(
A97
B1
)
67
35.8
A110-B101
(
A110
B101
)
68
35.8
A114-B45
(
A114
B45
)
69
35.3
A14-B66
(
A14
B66
)
70
35.2
A77-B87
(
A77
B87
)
71
35.2
A95-B28
(
A95
B28
)
72
34.6
A99-B17
(
A99
B17
)
73
34.6
A108-B16
(
A108
B16
)
74
34.5
A14-B36
(
A14
B36
)
75
34.5
A86-B30
(
A86
B30
)
77
34
A65-B69
(
A65
B69
)
78
34
A112-B43
(
A112
B43
)
79
33.9
A6-B24
(
A6
B24
)
80
33.3
A2-B1
(
A2
B1
)
81
33.3
A2-B51
(
A2
B51
)
82
33.3
A4-B3
(
A4
B3
)
83
33.3
A51-B30
(
A51
B30
)
84
33.3
A67-B88
(
A67
B88
)
85
33.3
A75-B85
(
A75
B85
)
86
33.3
A95-B97
(
A95
B97
)
87
33.3
A108-B33
(
A108
B33
)
88
32.8
A45-B29
(
A45
B29
)
90
32.7
A82-B27
(
A82
B27
)
92
32.7
A97-B51
(
A97
B51
)
93
32.7
A119-B13
(
A119
B13
)
94
32.7
A119-B14
(
A119
B14
)
95
32.1
A53-B31
(
A53
B31
)
96
32.1
A79-B88
(
A79
B88
)
97
32
A33-B8
(
A33
B8
)
99
31.7
A8-B81
(
A8
B81
)
100
31.7
A25-B69
(
A25
B69
)
101
31.7
A61-B29
(
A61
B29
)
102
31.7
A67-B29
(
A67
B29
)
103
31.7
A69-B29
(
A69
B29
)
104
31.7
A71-B96
(
A71
B96
)
105
31.7
A79-B28
(
A79
B28
)
106
31.7
A79-B30
(
A79
B30
)
107
31.7
A82-B96
(
A82
B96
)
109
31.6
A61-B27
(
A61
B27
)
111
31.5
A114-B51
(
A114
B51
)
112
31.4
A88-B2
(
A88
B2
)
115
31.1
A8-B82
(
A8
B82
)
116
31.1
A22-B67
(
A22
B67
)
117
31
A6-B85
(
A6
B85
)
118
31
A57-B88
(
A57
B88
)
119
31
A117-B36
(
A117
B36
)
121
30.9
A75-B31
(
A75
B31
)
122
30.9
A86-B31
(
A86
B31
)
123
30.8
A73-B30
(
A73
B30
)
124
30.6
A57-B28
(
A57
B28
)
126
30.4
A90-B88
(
A90
B88
)
127
30.4
A108-B34
(
A108
B34
)
128
30.4
A110-B86
(
A110
B86
)