A=Drosophilamelanogaster.Q9W157, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 118 A76-B4 A86-B14 A95-B23 ( A76 B4 A86 B14 A95 B23 )
2 116.1 A58-B4 A79-B25 A89-B35 ( A58 B4 A79 B25 A89 B35 )
3 112.8 A31-B1 A36-B6 A43-B13 ( A31 B1 A36 B6 A43 B13 )
5 76.5 A29-B5 A47-B23 ( A29 B5 A47 B23 )
7 72.4 A36-B14 A59-B37 ( A36 B14 A59 B37 )
9 43.8 A70-B35 ( A70 B35 )
10 41.9 A4-B5 ( A4 B5 )
12 41.2 A60-B24 ( A60 B24 )
13 40.6 A54-B29 ( A54 B29 )
14 40.6 A63-B12 ( A63 B12 )
15 39.4 A12-B12 ( A12 B12 )
16 38.7 A45-B13 ( A45 B13 )
17 38.7 A52-B10 ( A52 B10 )
18 38.7 A56-B22 ( A56 B22 )
19 37.5 A34-B20 ( A34 B20 )
21 37.5 A58-B12 ( A58 B12 )
22 37.5 A78-B11 ( A78 B11 )
23 37.5 A80-B5 ( A80 B5 )
24 37.5 A90-B16 ( A90 B16 )
25 36.7 A63-B11 ( A63 B11 )
26 36.4 A15-B7 ( A15 B7 )
27 35.5 A25-B14 ( A25 B14 )
28 35.5 A74-B16 ( A74 B16 )
29 35.5 A82-B17 ( A82 B17 )
30 35.3 A8-B15 ( A8 B15 )
31 35.3 A27-B21 ( A27 B21 )
32 35.3 A88-B12 ( A88 B12 )