A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =30, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
123.1
A41-B4
A67-B30
A74-B37
(
A41
B4
A67
B30
A74
B37
)
2
113.5
A15-B13
A20-B18
A30-B28
(
A15
B13
A20
B18
A30
B28
)
3
113.4
A32-B3
A41-B12
A53-B24
(
A32
B3
A41
B12
A53
B24
)
4
111.8
A43-B6
A67-B30
A74-B37
(
A43
B6
A67
B30
A74
B37
)
5
102.1
A8-B5
A16-B13
A39-B36
(
A8
B5
A16
B13
A39
B36
)
6
99.7
A59-B6
A69-B16
A87-B34
(
A59
B6
A69
B16
A87
B34
)
7
88.7
A52-B4
A85-B37
(
A52
B4
A85
B37
)
8
83.3
A63-B4
A72-B13
(
A63
B4
A72
B13
)
9
83.1
A85-B4
A94-B13
(
A85
B4
A94
B13
)
10
78.6
A52-B11
A57-B16
(
A52
B11
A57
B16
)
11
77.6
A46-B12
A53-B19
(
A46
B12
A53
B19
)
12
76.9
A107-B11
A120-B24
(
A107
B11
A120
B24
)
13
76.4
A63-B11
A69-B17
(
A63
B11
A69
B17
)
14
76.1
A21-B5
A26-B10
(
A21
B5
A26
B10
)
15
76.1
A85-B16
A97-B28
(
A85
B16
A97
B28
)
16
75.7
A74-B12
A96-B34
(
A74
B12
A96
B34
)
17
74.5
A74-B4
A83-B13
(
A74
B4
A83
B13
)
18
74.2
A79-B3
A93-B17
(
A79
B3
A93
B17
)
19
73.4
A30-B12
A40-B22
(
A30
B12
A40
B22
)
21
72
A69-B4
A93-B28
(
A69
B4
A93
B28
)
22
71.9
A99-B12
A117-B30
(
A99
B12
A117
B30
)
23
71.7
A21-B1
A37-B17
(
A21
B1
A37
B17
)
25
71
A24-B4
A37-B17
(
A24
B4
A37
B17
)
26
70.9
A114-B6
A121-B13
(
A114
B6
A121
B13
)
27
70.8
A39-B24
A52-B37
(
A39
B24
A52
B37
)
28
70.6
A8-B12
A31-B35
(
A8
B12
A31
B35
)
29
68.8
A74-B3
A103-B32
(
A74
B3
A103
B32
)
30
68.7
A12-B2
A41-B31
(
A12
B2
A41
B31
)
31
68.5
A52-B16
A57-B21
(
A52
B16
A57
B21
)
32
67.6
A74-B11
A80-B17
(
A74
B11
A80
B17
)
33
67.6
A85-B11
A91-B17
(
A85
B11
A91
B17
)
34
67.3
A48-B6
A76-B34
(
A48
B6
A76
B34
)
35
66.8
A81-B6
A91-B16
(
A81
B6
A91
B16
)
36
65.5
A1-B12
A20-B31
(
A1
B12
A20
B31
)
37
64.9
A63-B13
A75-B25
(
A63
B13
A75
B25
)
38
64.9
A102-B4
A110-B12
(
A102
B4
A110
B12
)
39
64.7
A43-B14
A53-B24
(
A43
B14
A53
B24
)
40
64.7
A85-B3
A98-B16
(
A85
B3
A98
B16
)
41
64.5
A19-B10
A36-B27
(
A19
B10
A36
B27
)
42
63.6
A41-B16
A46-B21
(
A41
B16
A46
B21
)
44
62.6
A54-B14
A63-B23
(
A54
B14
A63
B23
)
45
61.7
A50-B14
A57-B21
(
A50
B14
A57
B21
)
46
44.1
A99-B7
(
A99
B7
)
47
43.8
A74-B16
(
A74
B16
)
48
43.3
A15-B10
(
A15
B10
)
49
43.3
A85-B12
(
A85
B12
)
50
41.9
A46-B16
(
A46
B16
)
52
41.7
A99-B6
(
A99
B6
)
54
40
A35-B35
(
A35
B35
)
55
40
A116-B5
(
A116
B5
)
56
39.4
A10-B34
(
A10
B34
)
57
39.4
A57-B12
(
A57
B12
)
58
38.7
A30-B37
(
A30
B37
)
62
38.2
A95-B20
(
A95
B20
)
65
37.5
A67-B23
(
A67
B23
)
66
37.5
A95-B15
(
A95
B15
)
67
36.7
A28-B15
(
A28
B15
)
68
36.7
A37-B37
(
A37
B37
)
69
36.7
A120-B5
(
A120
B5
)
70
36.4
A26-B31
(
A26
B31
)
71
36.4
A32-B36
(
A32
B36
)
74
36.1
A41-B13
(
A41
B13
)
75
36.1
A52-B17
(
A52
B17
)
77
35.5
A109-B12
(
A109
B12
)
78
35.5
A112-B6
(
A112
B6
)
79
35.3
A41-B17
(
A41
B17
)
80
34.4
A6-B33
(
A6
B33
)
81
34.4
A10-B25
(
A10
B25
)
82
34.4
A19-B12
(
A19
B12
)
83
34.3
A79-B12
(
A79
B12
)
84
34.3
A112-B1
(
A112
B1
)
85
34.3
A112-B2
(
A112
B2
)
86
34.3
A114-B3
(
A114
B3
)
87
34.2
A52-B13
(
A52
B13
)
88
34.2
A74-B17
(
A74
B17
)
89
34.2
A85-B17
(
A85
B17
)
90
33.3
A17-B13
(
A17
B13
)
91
33.3
A26-B13
(
A26
B13
)
92
33.3
A46-B3
(
A46
B3
)
94
33.3
A57-B3
(
A57
B3
)
95
33.3
A63-B17
(
A63
B17
)
99
33.3
A95-B21
(
A95
B21
)
100
33.3
A99-B19
(
A99
B19
)
102
32.3
A41-B10
(
A41
B10
)
104
31.6
A52-B3
(
A52
B3
)
105
31.6
A63-B3
(
A63
B3
)
106
31.4
A61-B14
(
A61
B14
)
107
31.4
A90-B12
(
A90
B12
)
108
31.4
A120-B17
(
A120
B17
)
109
30.6
A32-B9
(
A32
B9
)
110
30.6
A37-B13
(
A37
B13
)
113
30.6
A97-B20
(
A97
B20
)
114
30.6
A107-B6
(
A107
B6
)
115
30.3
A6-B37
(
A6
B37
)
116
30.3
A10-B29
(
A10
B29
)
117
30.3
A19-B28
(
A19
B28
)
121
30.3
A120-B31
(
A120
B31
)