A=Drosophilamelanogaster.Q9W157, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =35, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 113.5 A35-B6 A47-B18 A58-B29 ( A35 B6 A47 B18 A58 B29 )
2 83.4 A56-B5 A82-B31 ( A56 B5 A82 B31 )
3 81 A58-B4 A79-B25 ( A58 B4 A79 B25 )
4 80.7 A76-B4 A92-B20 ( A76 B4 A92 B20 )
5 77.6 A26-B2 A47-B23 ( A26 B2 A47 B23 )
6 76.8 A54-B3 A82-B31 ( A54 B3 A82 B31 )
7 76.4 A13-B6 A35-B28 ( A13 B6 A35 B28 )
8 76 A18-B2 A45-B29 ( A18 B2 A45 B29 )
9 74.4 A52-B1 A82-B31 ( A52 B1 A82 B31 )
10 73.9 A1-B10 A21-B30 ( A1 B10 A21 B30 )
11 73.6 A56-B1 A84-B29 ( A56 B1 A84 B29 )
13 71.3 A28-B4 A47-B23 ( A28 B4 A47 B23 )
14 71.2 A58-B3 A84-B29 ( A58 B3 A84 B29 )
15 41.5 A11-B11 ( A11 B11 )
16 40.7 A6-B13 ( A6 B13 )
18 40.4 A76-B7 ( A76 B7 )
19 40.3 A66-B2 ( A66 B2 )
21 39.7 A74-B5 ( A74 B5 )
22 39.6 A93-B21 ( A93 B21 )
24 38.9 A1-B2 ( A1 B2 )
25 38.9 A64-B29 ( A64 B29 )
26 38.6 A44-B1 ( A44 B1 )
27 38.3 A33-B3 ( A33 B3 )
28 38.2 A42-B3 ( A42 B3 )
29 37.9 A62-B2 ( A62 B2 )
30 37.7 A9-B9 ( A9 B9 )
31 37.7 A64-B5 ( A64 B5 )
32 37.7 A89-B8 ( A89 B8 )
34 37.3 A35-B5 ( A35 B5 )
35 37.3 A60-B24 ( A60 B24 )
36 37.1 A60-B33 ( A60 B33 )
37 37 A37-B6 ( A37 B6 )
38 36.8 A58-B2 ( A58 B2 )
40 36.7 A93-B17 ( A93 B17 )
41 36.4 A15-B12 ( A15 B12 )
42 36.4 A68-B4 ( A68 B4 )
43 36.4 A91-B10 ( A91 B10 )
44 36.2 A52-B27 ( A52 B27 )
45 35.8 A76-B18 ( A76 B18 )
46 35.8 A87-B1 ( A87 B1 )
47 35.7 A4-B11 ( A4 B11 )
49 35.6 A13-B8 ( A13 B8 )
50 35.6 A28-B24 ( A28 B24 )
51 35.4 A31-B1 ( A31 B1 )
53 35.2 A62-B3 ( A62 B3 )
54 35.2 A93-B26 ( A93 B26 )
55 35.1 A6-B12 ( A6 B12 )
56 35.1 A71-B3 ( A71 B3 )