A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =25, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
1
45.5
A96-B4
(
A96
B4
)
2
44.6
A96-B3
(
A96
B3
)
3
41.4
A62-B2
(
A62
B2
)
4
41.1
A39-B2
(
A39
B2
)
5
40.4
A67-B2
(
A67
B2
)
6
39.7
A51-B2
(
A51
B2
)
7
38.5
A110-B13
(
A110
B13
)
8
38.0
A25-B12
(
A25
B12
)
9
37.5
A51-B3
(
A51
B3
)
10
37.5
A98-B5
(
A98
B5
)
11
37.0
A27-B14
(
A27
B14
)
12
36.4
A112-B2
(
A112
B2
)
13
36.4
A114-B3
(
A114
B3
)
14
36.2
A83-B2
(
A83
B2
)
15
36.1
A41-B3
(
A41
B3
)
16
36.0
A98-B15
(
A98
B15
)
17
35.8
A78-B2
A94-B18
(
A78
B2
A94
B18
)
18
35.2
A39-B10
(
A39
B10
)
19
35.0
A2-B12
(
A2
B12
)
20
34.6
A114-B10
(
A114
B10
)
21
34.5
A72-B15
(
A72
B15
)
22
34.5
A83-B15
(
A83
B15
)
23
34.5
A94-B2
(
A94
B2
)
24
33.8
A96-B5
(
A96
B5
)
25
33.5
A62-B3
A74-B15
(
A62
B3
A74
B15
)
26
33.3
A27-B34
(
A27
B34
)
27
32.8
A23-B6
(
A23
B6
)
28
32.8
A27-B35
(
A27
B35
)
29
32.8
A45-B2
(
A45
B2
)
30
32.8
A56-B2
(
A56
B2
)
31
32.7
A120-B17
(
A120
B17
)
32
32.4
A108-B5
A120-B17
(
A108
B5
A120
B17
)
33
32.1
A49-B1
(
A49
B1
)
34
31.8
A39-B3
(
A39
B3
)
35
31.6
A23-B7
(
A23
B7
)
36
31.5
A85-B4
(
A85
B4
)
37
31.5
A114-B20
(
A114
B20
)
38
31.5
A118-B22
(
A118
B22
)
39
31.4
A108-B6
(
A108
B6
)
40
31.2
A94-B18
(
A94
B18
)
41
31.0
A72-B2
A85-B15
(
A72
B2
A85
B15
)
42
30.9
A41-B12
(
A41
B12
)
43
30.8
A2-B13
(
A2
B13
)
44
30.6
A62-B4
(
A62
B4
)
45
30.6
A13-B11
A20-B18
(
A13
B11
A20
B18
)
46
30.4
A16-B13
(
A16
B13
)
47
30.4
A74-B3
(
A74
B3
)
48
30.4
A85-B3
(
A85
B3
)
49
30.2
A76-B14
(
A76
B14
)
50
29.8
A20-B1
(
A20
B1
)
51
29.4
A98-B4
A114-B20
(
A98
B4
A114
B20
)
52
29.4
A106-B9
(
A106
B9
)
53
29.3
A16-B12
A39-B35
(
A16
B12
A39
B35
)
54
29.3
A18-B30
(
A18
B30
)
55
29.3
A34-B3
(
A34
B3
)
56
29.0
A60-B1
A74-B15
(
A60
B1
A74
B15
)
57
28.6
A74-B4
A85-B15
(
A74
B4
A85
B15
)
58
28.6
A37-B13
(
A37
B13
)
59
28.6
A112-B10
(
A112
B10
)
60
28.6
A114-B27
(
A114
B27
)
61
28.6
A118-B23
(
A118
B23
)
62
28.6
A98-B11
A106-B19
A114-B27
(
A98
B11
A106
B19
A114
B27
)
63
28.5
A106-B19
A114-B27
(
A106
B19
A114
B27
)
64
28.4
A90-B4
A113-B27
(
A90
B4
A113
B27
)
65
28.1
A18-B10
(
A18
B10
)
66
28.1
A74-B11
(
A74
B11
)
67
28.1
A85-B11
(
A85
B11
)
68
28.0
A98-B3
A107-B12
A115-B20
(
A98
B3
A107
B12
A115
B20
)
69
27.9
A20-B18
(
A20
B18
)
70
27.9
A67-B3
(
A67
B3
)
71
27.9
A78-B3
(
A78
B3
)
72
27.7
A13-B3
A45-B35
(
A13
B3
A45
B35
)
73
27.7
A4-B3
A19-B18
(
A4
B3
A19
B18
)
74
27.4
A51-B4
(
A51
B4
)
75
27.3
A110-B5
(
A110
B5
)
76
27.3
A110-B6
(
A110
B6
)
77
27.3
A112-B7
(
A112
B7
)
78
27.0
A45-B1
(
A45
B1
)
79
27.0
A56-B1
(
A56
B1
)
80
26.6
A39-B35
(
A39
B35
)
81
26.6
A45-B35
(
A45
B35
)
82
26.6
A56-B35
(
A56
B35
)
83
26.5
A62-B1
(
A62
B1
)
84
26.2
A108-B11
(
A108
B11
)
85
25.9
A83-B3
A92-B12
(
A83
B3
A92
B12
)
86
25.9
A88-B10
(
A88
B10
)
87
25.8
A49-B2
(
A49
B2
)
88
25.8
A60-B2
(
A60
B2
)
89
25.8
A72-B3
A90-B21
A98-B29
(
A72
B3
A90
B21
A98
B29
)
90
25.8
A74-B15
(
A74
B15
)
91
25.8
A85-B15
(
A85
B15
)
92
25.4
A90-B21
A98-B29
(
A90
B21
A98
B29
)
93
25.4
A9-B34
(
A9
B34
)
94
25.4
A25-B8
(
A25
B8
)
95
25.4
A92-B12
(
A92
B12
)
96
25.4
A96-B17
(
A96
B17
)
97
25.4
A98-B29
(
A98
B29
)