A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no.
Average Score
Fragment alignment
Fasta links
2
50.0
A5-B18
(
A5
B18
)
5
48.2
A3-B3
A8-B8
A13-B13
A18-B18
A30-B30
(
A3
B3
A8
B8
A13
B13
A18
B18
A30
B30
)
6
47.8
A5-B5
A10-B10
A15-B15
A30-B30
(
A5
B5
A10
B10
A15
B15
A30
B30
)
8
47.2
A7-B7
A12-B12
A17-B17
A30-B30
(
A7
B7
A12
B12
A17
B17
A30
B30
)
15
45.4
A9-B9
A14-B14
A30-B30
(
A9
B9
A14
B14
A30
B30
)
17
44.6
A25-B4
A41-B20
A50-B29
(
A25
B4
A41
B20
A50
B29
)
20
43.8
A7-B20
(
A7
B20
)
24
43.8
A44-B11
A50-B17
(
A44
B11
A50
B17
)
35
41.2
A5-B16
(
A5
B16
)
49
40.0
A38-B13
A54-B29
(
A38
B13
A54
B29
)
50
39.7
A15-B4
A23-B12
A35-B24
(
A15
B4
A23
B12
A35
B24
)
64
38.5
A9-B13
A14-B18
(
A9
B13
A14
B18
)
66
38.4
A1-B8
A10-B17
A25-B32
(
A1
B8
A10
B17
A25
B32
)
79
37.1
A36-B8
(
A36
B8
)
82
37.0
A3-B7
A8-B12
A14-B18
(
A3
B7
A8
B12
A14
B18
)
83
36.8
A23-B12
A35-B24
(
A23
B12
A35
B24
)
88
36.4
A27-B14
(
A27
B14
)
96
36.0
A31-B7
A40-B16
A47-B23
(
A31
B7
A40
B16
A47
B23
)
99
35.8
A40-B16
A47-B23
(
A40
B16
A47
B23
)