A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =30, length of fragment = 30, sorted based on average %similarity , Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
2 153.8 A3-B3 A9-B9 A14-B14 ( A3 B3 A9 B9 A14 B14 )
3 150.5 A5-B5 A10-B10 A15-B15 ( A5 B5 A10 B10 A15 B15 )
4 132.6 A7-B7 A12-B12 A17-B17 ( A7 B7 A12 B12 A17 B17 )
5 130.7 A31-B9 A38-B16 A46-B24 A54-B32 ( A31 B9 A38 B16 A46 B24 A54 B32 )
6 104.2 A1-B7 A14-B20 A24-B30 ( A1 B7 A14 B20 A24 B30 )
7 104.1 A7-B12 A20-B25 A33-B38 ( A7 B12 A20 B25 A33 B38 )
8 100.3 A1-B8 A10-B17 A25-B32 ( A1 B8 A10 B17 A25 B32 )
13 91.9 A45-B12 A50-B17 ( A45 B12 A50 B17 )
16 83 A41-B20 A54-B33 ( A41 B20 A54 B33 )
19 71 A27-B20 A47-B40 ( A27 B20 A47 B40 )
25 64.7 A9-B13 A14-B18 ( A9 B13 A14 B18 )
27 63.6 A35-B12 A46-B23 ( A35 B12 A46 B23 )
28 63.5 A51-B5 A57-B11 ( A51 B5 A57 B11 )
29 63 A37-B16 A54-B33 ( A37 B16 A54 B33 )
34 41.9 A7-B20 ( A7 B20 )
35 40.6 A5-B18 ( A5 B18 )
38 40 A39-B13 ( A39 B13 )
44 37.5 A35-B7 ( A35 B7 )
47 36.4 A27-B14 ( A27 B14 )
65 31.4 A37-B8 ( A37 B8 )