A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 113.8 A91-B4 A99-B12 A117-B30 ( A91 B4 A99 B12 A117 B30 )
2 113.5 A15-B13 A20-B18 A30-B28 ( A15 B13 A20 B18 A30 B28 )
3 88.7 A41-B4 A74-B37 ( A41 B4 A74 B37 )
4 83.9 A9-B17 A27-B35 ( A9 B17 A27 B35 )
5 83.1 A85-B4 A94-B13 ( A85 B4 A94 B13 )
6 80.1 A32-B3 A41-B12 ( A32 B3 A41 B12 )
7 77.6 A46-B12 A53-B19 ( A46 B12 A53 B19 )
8 77.6 A51-B3 A85-B37 ( A51 B3 A85 B37 )
9 77.4 A43-B6 A74-B37 ( A43 B6 A74 B37 )
10 76.9 A107-B11 A120-B24 ( A107 B11 A120 B24 )
11 76.7 A2-B12 A25-B35 ( A2 B12 A25 B35 )
12 76.2 A53-B5 A85-B37 ( A53 B5 A85 B37 )
13 74.2 A79-B3 A93-B17 ( A79 B3 A93 B17 )
14 73.4 A30-B12 A40-B22 ( A30 B12 A40 B22 )
16 43.8 A64-B5 ( A64 B5 )
17 43.8 A74-B16 ( A74 B16 )
18 43.8 A85-B16 ( A85 B16 )
19 43.3 A15-B10 ( A15 B10 )
20 43.3 A74-B12 ( A74 B12 )
21 43.3 A85-B12 ( A85 B12 )
22 41.9 A46-B16 ( A46 B16 )
23 41.9 A57-B16 ( A57 B16 )
24 41.2 A39-B36 ( A39 B36 )
25 41.2 A74-B4 ( A74 B4 )
26 40 A2-B13 ( A2 B13 )
27 40 A35-B35 ( A35 B35 )
28 40 A98-B4 ( A98 B4 )
29 40 A116-B5 ( A116 B5 )
30 39.4 A57-B12 ( A57 B12 )
31 38.9 A62-B3 ( A62 B3 )
32 38.9 A98-B5 ( A98 B5 )
33 38.7 A24-B4 ( A24 B4 )
34 38.7 A30-B37 ( A30 B37 )
35 38.7 A69-B4 ( A69 B4 )
41 38.2 A95-B20 ( A95 B20 )
42 38.2 A98-B6 ( A98 B6 )
44 37.5 A39-B24 ( A39 B24 )
45 37.5 A41-B31 ( A41 B31 )
46 37.5 A67-B23 ( A67 B23 )
47 37.5 A95-B15 ( A95 B15 )
48 36.7 A28-B15 ( A28 B15 )
49 36.7 A37-B37 ( A37 B37 )
50 36.7 A48-B6 ( A48 B6 )
51 36.7 A59-B6 ( A59 B6 )
52 36.7 A98-B15 ( A98 B15 )
53 36.7 A100-B17 ( A100 B17 )
54 36.7 A120-B5 ( A120 B5 )
55 36.4 A11-B37 ( A11 B37 )
56 36.4 A26-B31 ( A26 B31 )
57 36.4 A32-B36 ( A32 B36 )
58 36.4 A69-B17 ( A69 B17 )
59 36.4 A91-B17 ( A91 B17 )
61 36.1 A41-B13 ( A41 B13 )
62 35.5 A26-B10 ( A26 B10 )
63 35.5 A103-B32 ( A103 B32 )
64 35.5 A109-B12 ( A109 B12 )
65 35.5 A112-B6 ( A112 B6 )
66 35.3 A41-B17 ( A41 B17 )
67 35.3 A53-B17 ( A53 B17 )
68 35.3 A64-B32 ( A64 B32 )