A=Drosophilapseudoobscura.Q28WW7, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 51.4 A97-B5 ( A97 B5 )
2 50.0 A116-B4 ( A116 B4 )
3 47.1 A39-B36 ( A39 B36 )
4 47.1 A95-B20 ( A95 B20 )
5 46.3 A41-B4 A65-B28 ( A41 B4 A65 B28 )
6 45.7 A10-B25 ( A10 B25 )
7 45.7 A114-B3 ( A114 B3 )
8 45.5 A109-B12 ( A109 B12 )
9 45.2 A27-B35 ( A27 B35 )
10 45.2 A116-B5 ( A116 B5 )
11 44.4 A41-B13 ( A41 B13 )
12 44.1 A35-B35 ( A35 B35 )
13 44.1 A63-B4 A94-B35 ( A63 B4 A94 B35 )
14 44.1 A99-B7 ( A99 B7 )
15 43.8 A65-B19 ( A65 B19 )
16 43.8 A74-B16 ( A74 B16 )
17 43.8 A112-B3 ( A112 B3 )
18 43.3 A27-B14 ( A27 B14 )
19 43.3 A85-B12 ( A85 B12 )
20 43.2 A52-B4 A61-B13 ( A52 B4 A61 B13 )
21 42.7 A69-B4 A85-B20 ( A69 B4 A85 B20 )
22 42.5 A43-B6 A65-B28 ( A43 B6 A65 B28 )
23 42.4 A14-B9 ( A14 B9 )
24 42.4 A50-B30 ( A50 B30 )
25 42.4 A91-B17 ( A91 B17 )
26 42.4 A97-B3 A115-B21 ( A97 B3 A115 B21 )
27 42.1 A25-B5 A50-B30 ( A25 B5 A50 B30 )
28 42.1 A10-B18 A15-B23 A27-B35 ( A10 B18 A15 B23 A27 B35 )
29 42.0 A21-B20 A26-B25 ( A21 B20 A26 B25 )
30 41.7 A99-B6 ( A99 B6 )
31 41.5 A85-B4 A94-B13 ( A85 B4 A94 B13 )
32 41.3 A80-B4 A94-B18 A100-B24 ( A80 B4 A94 B18 A100 B24 )
33 41.2 A23-B23 A35-B35 ( A23 B23 A35 B35 )
34 41.1 A16-B12 A24-B20 ( A16 B12 A24 B20 )
35 41.1 A85-B16 A94-B25 ( A85 B16 A94 B25 )
36 40.6 A33-B12 ( A33 B12 )
37 40.6 A95-B15 ( A95 B15 )
38 40.6 A121-B13 ( A121 B13 )
39 40.5 A55-B32 ( A55 B32 )
40 40.3 A23-B3 A50-B30 ( A23 B3 A50 B30 )
41 40.3 A39-B21 A46-B28 ( A39 B21 A46 B28 )
42 40.2 A91-B4 A98-B11 A117-B30 ( A91 B4 A98 B11 A117 B30 )
43 40.0 A46-B3 ( A46 B3 )
44 40.0 A69-B13 ( A69 B13 )
45 40.0 A80-B13 ( A80 B13 )
46 40.0 A121-B17 ( A121 B17 )
47 39.7 A74-B12 A84-B22 ( A74 B12 A84 B22 )
48 39.4 A67-B2 A85-B20 ( A67 B2 A85 B20 )
49 39.4 A107-B11 A120-B24 ( A107 B11 A120 B24 )
50 39.4 A31-B35 ( A31 B35 )
51 39.4 A46-B28 ( A46 B28 )
52 39.4 A57-B12 ( A57 B12 )
53 39.4 A57-B28 ( A57 B28 )
54 39.2 A78-B2 A94-B18 A100-B24 ( A78 B2 A94 B18 A100 B24 )
55 39.1 A57-B3 A74-B20 ( A57 B3 A74 B20 )
56 39.0 A74-B4 A95-B25 ( A74 B4 A95 B25 )
57 38.9 A55-B26 ( A55 B26 )
58 38.9 A85-B3 ( A85 B3 )
59 38.9 A87-B14 ( A87 B14 )
60 38.7 A48-B6 A72-B30 A78-B36 ( A48 B6 A72 B30 A78 B36 )
61 38.6 A89-B2 A98-B11 A117-B30 ( A89 B2 A98 B11 A117 B30 )
62 38.5 A41-B12 A55-B26 ( A41 B12 A55 B26 )
63 38.5 A72-B30 A78-B36 ( A72 B30 A78 B36 )
64 38.5 A37-B20 A53-B36 ( A37 B20 A53 B36 )
65 38.2 A41-B7 A46-B12 A53-B19 ( A41 B7 A46 B12 A53 B19 )
66 38.2 A6-B30 ( A6 B30 )
67 38.2 A37-B4 ( A37 B4 )
68 38.2 A52-B16 ( A52 B16 )
69 38.2 A52-B20 ( A52 B20 )
70 38.2 A74-B20 ( A74 B20 )
71 38.2 A85-B20 ( A85 B20 )
72 38.0 A83-B30 A90-B37 ( A83 B30 A90 B37 )
73 38.0 A12-B2 A17-B7 A41-B31 ( A12 B2 A17 B7 A41 B31 )
74 38.0 A41-B10 A67-B36 ( A41 B10 A67 B36 )
75 37.8 A1-B12 ( A1 B12 )
76 37.8 A69-B17 ( A69 B17 )
77 37.8 A80-B17 ( A80 B17 )
78 37.6 A74-B3 A101-B30 ( A74 B3 A101 B30 )
79 37.5 A59-B6 A70-B17 A83-B30 A90-B37 ( A59 B6 A70 B17 A83 B30 A90 B37 )
80 37.5 A37-B12 ( A37 B12 )
81 37.5 A41-B31 ( A41 B31 )
82 37.5 A67-B23 ( A67 B23 )
83 37.5 A76-B14 A84-B22 ( A76 B14 A84 B22 )
84 37.5 A95-B29 ( A95 B29 )
85 37.3 A46-B12 A53-B19 ( A46 B12 A53 B19 )
86 37.2 A33-B5 A40-B12 ( A33 B5 A40 B12 )
87 37.1 A46-B16 ( A46 B16 )
88 37.1 A57-B16 ( A57 B16 )
89 37.1 A67-B36 ( A67 B36 )
90 37.1 A78-B36 ( A78 B36 )
91 37.1 A121-B18 ( A121 B18 )
92 37.1 A63-B11 A69-B17 ( A63 B11 A69 B17 )
93 36.9 A52-B11 A57-B16 ( A52 B11 A57 B16 )
94 36.8 A14-B11 A38-B35 ( A14 B11 A38 B35 )
95 36.8 A14-B12 A20-B18 A30-B28 A38-B36 ( A14 B12 A20 B18 A30 B28 A38 B36 )
96 36.8 A95-B25 ( A95 B25 )
97 36.7 A37-B37 ( A37 B37 )
98 36.5 A25-B19 A41-B35 ( A25 B19 A41 B35 )
99 36.4 A14-B3 ( A14 B3 )
100 36.4 A41-B35 ( A41 B35 )
101 36.4 A61-B13 ( A61 B13 )
102 36.4 A65-B28 ( A65 B28 )
103 36.4 A101-B30 ( A101 B30 )
104 36.1 A25-B12 ( A25 B12 )
105 36.1 A29-B36 ( A29 B36 )
106 36.1 A52-B17 ( A52 B17 )
107 36.1 A63-B16 ( A63 B16 )
108 36.1 A107-B10 ( A107 B10 )
109 36.1 A112-B10 ( A112 B10 )
110 36.1 A114-B19 ( A114 B19 )
111 36.1 A119-B15 ( A119 B15 )
112 35.9 A8-B26 ( A8 B26 )
113 35.9 A93-B19 ( A93 B19 )
114 35.8 A72-B1 A101-B30 ( A72 B1 A101 B30 )
115 35.6 A4-B11 A29-B36 ( A4 B11 A29 B36 )
116 35.6 A50-B1 A81-B32 ( A50 B1 A81 B32 )
117 35.5 A31-B19 ( A31 B19 )
118 35.3 A19-B28 ( A19 B28 )
119 35.3 A31-B5 ( A31 B5 )
120 35.3 A61-B1 ( A61 B1 )
121 35.3 A83-B1 ( A83 B1 )
122 35.3 A116-B37 ( A116 B37 )
123 35.1 A10-B34 ( A10 B34 )
124 35.1 A76-B25 ( A76 B25 )
125 35.1 A87-B25 ( A87 B25 )
126 35.1 A114-B24 ( A114 B24 )