A=Drosophilamelanogaster.Q9W157, B=Caenorhabditiselegans.G5EG86, Threshold for similarity =30, length of fragment = 50, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 39.0 A76-B4 A93-B21 ( A76 B4 A93 B21 )
2 37.3 A18-B26 ( A18 B26 )
3 37.0 A33-B3 ( A33 B3 )
4 36.8 A58-B2 ( A58 B2 )
5 36.5 A79-B4 ( A79 B4 )
6 36.0 A10-B10 ( A10 B10 )
7 35.3 A90-B9 ( A90 B9 )
8 35.2 A47-B23 ( A47 B23 )
9 35.2 A62-B3 ( A62 B3 )
10 34.6 A88-B14 ( A88 B14 )
11 34.0 A3-B10 ( A3 B10 )
12 34.0 A13-B13 ( A13 B13 )
13 34.0 A22-B31 ( A22 B31 )
14 34.0 A71-B16 ( A71 B16 )
15 33.9 A83-B32 ( A83 B32 )
16 33.3 A35-B5 ( A35 B5 )
17 33.3 A92-B11 ( A92 B11 )
18 32.7 A33-B9 A47-B23 ( A33 B9 A47 B23 )
19 32.5 A58-B3 A71-B16 ( A58 B3 A71 B16 )
20 32.4 A76-B9 A92-B25 ( A76 B9 A92 B25 )
21 32.1 A56-B22 A64-B30 ( A56 B22 A64 B30 )
22 31.6 A3-B9 ( A3 B9 )
23 31.6 A44-B10 A53-B19 A64-B30 ( A44 B10 A53 B19 A64 B30 )
24 31.0 A52-B27 ( A52 B27 )
25 31.0 A64-B30 ( A64 B30 )
26 30.8 A81-B34 ( A81 B34 )
27 30.4 A8-B35 ( A8 B35 )
28 30.4 A31-B2 ( A31 B2 )
29 30.4 A54-B13 ( A54 B13 )
30 30.2 A54-B34 ( A54 B34 )
31 30.2 A92-B25 ( A92 B25 )