A=Mouse.Q8VCY6, B=Saccharomyces.Q02354, Threshold for similarity =35, length of fragment = 30, sorted based on average %similarity, Multiply index with 10 to get sequence starting position in original sequence
Sl no. Average Score Fragment alignment Fasta links
1 54.5 A17-B17 ( A17 B17 )
2 51.3 A3-B3 A9-B9 A14-B14 ( A3 B3 A9 B9 A14 B14 )
3 50.2 A5-B5 A10-B10 A15-B15 ( A5 B5 A10 B10 A15 B15 )
4 50.0 A50-B17 ( A50 B17 )
5 49.6 A1-B1 A6-B6 A11-B11 A16-B16 ( A1 B1 A6 B6 A11 B11 A16 B16 )
6 49.2 A11-B11 A16-B16 ( A11 B11 A16 B16 )
7 47.8 A9-B9 A14-B14 ( A9 B9 A14 B14 )
8 46.0 A45-B12 A50-B17 ( A45 B12 A50 B17 )
9 45.2 A34-B6 ( A34 B6 )
10 44.2 A7-B7 A12-B12 A17-B17 ( A7 B7 A12 B12 A17 B17 )
11 43.8 A54-B29 ( A54 B29 )
12 42.5 A13-B13 A18-B18 ( A13 B13 A18 B18 )
13 42.4 A15-B15 ( A15 B15 )
14 42.0 A29-B22 A47-B40 ( A29 B22 A47 B40 )
15 41.9 A7-B20 ( A7 B20 )
16 41.9 A50-B4 ( A50 B4 )
17 41.2 A54-B17 ( A54 B17 )
18 40.6 A5-B18 ( A5 B18 )
19 40.6 A15-B30 ( A15 B30 )
20 40.6 A56-B31 ( A56 B31 )
21 40.5 A17-B18 ( A17 B18 )
22 38.9 A17-B32 ( A17 B32 )
23 38.7 A13-B40 ( A13 B40 )
24 38.7 A19-B38 ( A19 B38 )
25 38.7 A31-B11 ( A31 B11 )
26 38.7 A47-B40 ( A47 B40 )
27 38.2 A5-B36 ( A5 B36 )
28 38.1 A3-B30 A13-B40 ( A3 B30 A13 B40 )
29 37.5 A38-B16 ( A38 B16 )
30 37.5 A40-B24 ( A40 B24 )
31 37.5 A43-B39 ( A43 B39 )
32 36.7 A1-B8 ( A1 B8 )
33 36.7 A38-B35 ( A38 B35 )
34 36.4 A21-B26 A36-B41 ( A21 B26 A36 B41 )
35 36.4 A23-B6 ( A23 B6 )
36 36.4 A27-B14 ( A27 B14 )
37 35.5 A15-B24 ( A15 B24 )
38 35.5 A21-B38 ( A21 B38 )
39 35.5 A38-B30 ( A38 B30 )
40 35.3 A5-B41 ( A5 B41 )
41 35.3 A36-B41 ( A36 B41 )
42 35.1 A13-B14 ( A13 B14 )
43 35.1 A15-B16 ( A15 B16 )