DATASET
VeridicalOutExample.xls (113.5 kB)
TEXT
all.vin (3.3 kB)
TEXT
allTumorsBAMFileList.txt (51.51 kB)
TEXT
allNormalsBAMFileList.txt (12.21 kB)
TEXT
all.vout (316.68 kB)
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Input, output, and explanatory files for Veridical
dataset
posted on 2014-01-14, 08:24 authored by Coby VinerCoby Viner, Stephanie N. Dorman, Ben C. Shirley, Peter K. RoganVeridicalOutExample.xls: contains the output for the variant within RAD54L, along with descriptions of the terms used and the output format.
all.vin: contains the full set of input variants for Veridical used in this paper.
allTumoursBAMFileList.txt: The list of BAM files for the RNASeq data of the breast tumour samples analyzed. This contains TCGA file UUIDs, followed by a slash, followed by the file names themselves.
allNormalsBAMFileList.txt: The list of BAM files for the RNASeq data of the normal samples corresponding to these tumors. This contains TCGA file UUIDs, followed by a slash, followed by the file names themselves.
all.vout: The full Veridical output produced when running Veridical with all.vin.
