Oliver, Gavin Aligner execution scripts <p>BASH scripts to process SAM files and perform variant calling with GATK</p> BWA;novo;smalt;bfast;bwa;mosaik;stampy;omixon;bowtie2;Genetics 2012-10-02
    https://f1000.figshare.com/articles/dataset/Alignment_processing_and_variant_calling_scripts__/94257
10.6084/m9.figshare.94257.v1